C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: calicin
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000070999 Ccin 10090 + 4:43983483-43985423 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000095107 Ccin-001 43983483-43985423 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENSMUST00000095107
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENSMUST00000095107 0.066±0.03 0.028±0.00 0.020±0.00 0.120±0.00 0.107±0.02 0.042±0.02 0.052±0.02 0.052±0.01 0.018±0.00 0.050±0.04 0.157±0.09 0.049±0.03 133.554±36.81

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006K1 CIL_0006K1_0002 CGP 4:43957401-43985423
CIL_0006K2 CIL_0006K2_0002 CGP 4:43983483-44032846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0005856 IEA cytoskeleton
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008150 ND biological_process
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000093836 si:dkey-83f18.14 calicin protein_coding Danio_rerio
ENSG00000185972 CCIN calicin protein_coding Homo_sapiens

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