C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 566
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186017 ZNF566 9606 - 19:36445119-36489902 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000392170 ZNF566-001 36447629-36489561 protein_coding
  ENST00000424129 ZNF566-002 36447682-36489506 protein_coding
  ENST00000427002 ZNF566-009 36449764-36489537 protein_coding
  ENST00000434377 ZNF566-201 36445119-36489435 protein_coding
  ENST00000452939 ZNF566-008 36449533-36489518 protein_coding
  ENST00000460937 ZNF566-006 36472991-36489519 retained_intron
  ENST00000472909 ZNF566-007 36456460-36489902 processed_transcript
  ENST00000480361 ZNF566-005 36473141-36489561 retained_intron
  ENST00000493391 ZNF566-003 36447021-36489861 protein_coding
  ENST00000494354 ZNF566-004 36476109-36489902 retained_intron
  ENST00000587567 ZNF566-010 36445119-36449555 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000392170ENST00000424129ENST00000434377ENST00000452939ENST00000480361ENST00000493391ENST00000587567
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000392170 N/A N/A N/A N/A 0.422±0.00 0.256±0.09 N/A 0.388±0.00 N/A N/A N/A N/A N/A
ENST00000424129 N/A N/A N/A N/A N/A N/A N/A N/A 1.330±0.00 N/A 0.795±0.00 N/A N/A
ENST00000434377 0.439±0.00 1.250±0.00 0.823±0.04 0.482±0.00 0.558±0.00 0.474±0.37 0.532±0.39 0.265±0.00 0.470±0.05 0.836±0.00 1.170±0.29 0.489±0.22 1.095±0.00
ENST00000452939 N/A N/A N/A 1.787±0.00 1.454±0.00 N/A N/A N/A N/A N/A 2.088±0.00 N/A N/A
ENST00000480361 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.348±0.00 N/A N/A N/A
ENST00000493391 N/A N/A 0.673±0.29 0.590±0.36 0.254±0.00 0.284±0.00 N/A 0.884±0.00 0.538±0.00 0.068±0.00 N/A N/A N/A
ENST00000587567 N/A 1.468±0.00 N/A 0.893±0.00 0.753±0.00 N/A 0.868±0.00 0.386±0.00 0.353±0.00 N/A 1.699±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DS CIL_0006DS_0001 CGP 19:36383120-36489902
CIL_000465 CIL_000465_0001 CGP 19:36445119-36528660

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000058447 Gm26920 predicted gene, 26920 protein_coding Mus_musculus
ENSMUSG00000078768 Zfp566 zinc finger protein 566 protein_coding Mus_musculus

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