C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: zinc finger protein 566
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427002 ZNF566-009 ENSG00000186017 9606 - 19:36449764-36489537 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DS CIL_0006DS_0001 CGP 19:36383120-36489902
CIL_000465 CIL_000465_0001 CGP 19:36445119-36528660

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0005622 IEA intracellular
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000182746 Gm26920-001 nonsense_mediated_decay Mus_musculus 2.00386e-43 180
ENSMUST00000182248 Zfp566-002 retained_intron Mus_musculus 2.00386e-43 180
ENSMUST00000088785 Zfp566-001 protein_coding Mus_musculus 2.00386e-43 180
ENSMUST00000039726 3110052M02Rik-201 protein_coding Mus_musculus 1e-25 121
ENSMUST00000191265 RP23-133G16.2-001 protein_coding Mus_musculus 8e-22 108
ENSMUST00000186341 RP23-113N18.3-001 protein_coding Mus_musculus 1e-20 104
ENSMUST00000167749 Zfp54-003 protein_coding Mus_musculus 5e-19 99
ENSMUST00000007884 Zfp54-001 protein_coding Mus_musculus 5e-19 99
ENSMUST00000165230 Zfp54-002 protein_coding Mus_musculus 5e-19 99
ENSMUST00000091481 Zfp72-201 protein_coding Mus_musculus 2e-17 94

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