C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: gamma-aminobutyric acid (GABA) A receptor, alpha 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186297 GABRA5 9606 + 15:26866363-26949207 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335625 GABRA5-001 26866363-26949207 protein_coding
  ENST00000355395 GABRA5-002 26866911-26948752 protein_coding
  ENST00000400081 GABRA5-201 26867126-26949207 protein_coding
  ENST00000554038 GABRA5-004 26867163-26883215 protein_coding
  ENST00000554083 GABRA5-009 26880543-26883413 protein_coding
  ENST00000554596 GABRA5-005 26867242-26883506 protein_coding
  ENST00000554599 GABRA5-008 26868715-26883557 protein_coding
  ENST00000555060 GABRA5-007 26867829-26869296 protein_coding
  ENST00000555182 GABRA5-010 26867072-26937199 protein_coding
  ENST00000557449 GABRA5-006 26867245-26914850 processed_transcript
  ENST00000557484 GABRA5-003 26867120-26877684 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000335625ENST00000355395ENST00000400081ENST00000555182
Transcript ID Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000335625 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.206±0.00
ENST00000355395 0.021±0.00 N/A 0.099±0.09 0.013±0.00 0.023±0.00 0.046±0.00 0.067±0.00 0.083±0.00 0.017±0.00 0.296±0.00
ENST00000400081 N/A 13.236±4.78 N/A N/A N/A N/A N/A 0.035±0.03 N/A N/A
ENST00000555182 N/A N/A N/A N/A N/A N/A N/A 0.210±0.00 N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001662 IEA behavioral fear response
GO:0004872 TAS receptor activity
GO:0004890 IEA GABA-A receptor activity
GO:0005215 TAS transporter activity
GO:0005230 IEA extracellular ligand-gated ion channel activity
GO:0005254 IEA chloride channel activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0006810 TAS:IEA transport
GO:0006811 IEA ion transport
GO:0006821 IEA chloride transport
GO:0007165 IEA:TAS signal transduction
GO:0007214 IEA gamma-aminobutyric acid signaling pathway
GO:0007268 TAS synaptic transmission
GO:0007420 IEA brain development
GO:0007605 IEA sensory perception of sound
GO:0008306 IEA associative learning
GO:0016020 IEA membrane
GO:0016021 IEA integral component of membrane
GO:0030054 IEA cell junction
GO:0030425 IEA dendrite
GO:0032809 IEA neuronal cell body membrane
GO:0034220 IEA:TAS ion transmembrane transport
GO:0034707 IEA chloride channel complex
GO:0043235 IEA receptor complex
GO:0043523 IEA regulation of neuron apoptotic process
GO:0043524 IEA negative regulation of neuron apoptotic process
GO:0044297 IEA cell body
GO:0045211 IEA postsynaptic membrane
GO:0048666 IEA neuron development
GO:0050811 IEA GABA receptor binding
GO:0055085 TAS transmembrane transport
GO:0060119 IEA inner ear receptor cell development
GO:0060384 IEA innervation
GO:0090102 IEA cochlea development
GO:1902476 IEA chloride transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070730 gabra5 gamma-aminobutyric acid (GABA) A receptor, alpha 5 protein_coding Danio_rerio
ENSMUSG00000055078 Gabra5 gamma-aminobutyric acid (GABA) A receptor, subunit alpha 5 protein_coding Mus_musculus

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