C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: coiled-coil domain containing 30
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186409 CCDC30 9606 + 1:42463330-42654664 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340612 CCDC30-001 42536485-42654340 protein_coding
  ENST00000342022 CCDC30-201 42534889-42654664 protein_coding
  ENST00000428554 CCDC30-202 42482656-42654181 protein_coding
  ENST00000462063 CCDC30-011 42467744-42473385 processed_transcript
  ENST00000468651 CCDC30-012 42463426-42473417 processed_transcript
  ENST00000471390 CCDC30-004 42533879-42654190 nonsense_mediated_decay
  ENST00000471699 CCDC30-010 42581434-42590461 processed_transcript
  ENST00000475614 CCDC30-008 42463330-42482996 processed_transcript
  ENST00000477155 CCDC30-002 42463354-42654186 nonsense_mediated_decay
  ENST00000492422 CCDC30-006 42463922-42473560 processed_transcript
  ENST00000495044 CCDC30-003 42482694-42537985 retained_intron
  ENST00000507855 CCDC30-013 42489929-42654186 protein_coding
  ENST00000509712 CCDC30-014 42497111-42581416 nonsense_mediated_decay
  ENST00000514642 CCDC30-015 42536573-42595573 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLungOvaryTestisENST00000342022ENST00000477155ENST00000507855ENST00000514642
Transcript ID Bladder Breast Lung Ovary Testis
ENST00000342022 N/A N/A N/A N/A 5.025±0.00
ENST00000477155 0.761±0.00 N/A N/A N/A 3.306±0.00
ENST00000507855 N/A N/A N/A 0.434±0.00 N/A
ENST00000514642 N/A 0.376±0.00 0.433±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PM CIL_0008PM_0001 VISTA 1:42456139-43057783

Gene Ontology

GO IDEvidence TypeGO Description
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056961 CCDC30 coiled-coil domain containing 30 protein_coding Danio_rerio
ENSMUSG00000028637 Ccdc30 coiled-coil domain containing 30 protein_coding Mus_musculus

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