C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 5 open reading frame 38
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186493 C5orf38 9606 + 5:2752131-2755397 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334000 C5orf38-001 2752148-2755397 protein_coding
  ENST00000397835 C5orf38-007 2752265-2755376 protein_coding
  ENST00000457752 C5orf38-003 2752131-2755081 protein_coding
  ENST00000503940 C5orf38-004 2752228-2755081 nonsense_mediated_decay
  ENST00000505106 C5orf38-002 2752228-2755081 nonsense_mediated_decay
  ENST00000505778 C5orf38-006 2752228-2755081 protein_coding
  ENST00000515640 C5orf38-005 2752246-2754373 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000334000ENST00000397835ENST00000457752ENST00000503940ENST00000505106ENST00000515640
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000334000 N/A N/A N/A N/A 1.408±0.00 N/A 0.397±0.00 N/A 0.532±0.00 0.429±0.00 1.590±0.00 0.891±0.00
ENST00000397835 0.987±0.00 N/A N/A 0.181±0.00 2.687±0.00 N/A N/A 4.610±0.00 6.795±0.00 0.205±0.12 1.787±0.29 0.404±0.00
ENST00000457752 1.946±0.00 0.363±0.00 N/A N/A 5.709±0.00 N/A 2.305±0.00 N/A N/A 9.531±9.22 9.430±5.47 1.974±0.00
ENST00000503940 N/A N/A N/A N/A N/A 0.088±0.00 N/A N/A N/A 0.108±0.00 N/A N/A
ENST00000505106 N/A N/A N/A N/A N/A 0.010±0.00 N/A N/A N/A N/A N/A N/A
ENST00000515640 0.838±0.00 0.016±0.00 0.888±0.00 0.091±0.00 0.647±0.61 N/A 0.284±0.00 2.447±0.00 0.347±0.00 1.125±1.09 0.854±0.51 0.719±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007OW CIL_0007OW_0001 UCNEbase 5:2112412-4025148

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005576 IEA extracellular region

Homologs

No Homologs available.

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