C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 86, member B1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186523 FAM86B1 9606 - 8:12182096-12194133 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340537 FAM86B1-017 12182098-12194082 nonsense_mediated_decay
  ENST00000431227 FAM86B1-005 12182110-12193682 nonsense_mediated_decay
  ENST00000448228 FAM86B1-016 12182451-12194120 protein_coding
  ENST00000524571 FAM86B1-032 12186062-12194067 protein_coding
  ENST00000524893 FAM86B1-003 12183480-12194082 nonsense_mediated_decay
  ENST00000525822 FAM86B1-036 12185234-12191813 retained_intron
  ENST00000526708 FAM86B1-004 12185376-12194098 nonsense_mediated_decay
  ENST00000527300 FAM86B1-034 12183393-12194070 nonsense_mediated_decay
  ENST00000529060 FAM86B1-029 12185376-12194065 nonsense_mediated_decay
  ENST00000529146 FAM86B1-015 12182096-12191844 nonsense_mediated_decay
  ENST00000529617 FAM86B1-031 12185455-12194108 retained_intron
  ENST00000530385 FAM86B1-012 12183121-12194133 nonsense_mediated_decay
  ENST00000530508 FAM86B1-038 12183441-12186386 retained_intron
  ENST00000531833 FAM86B1-027 12185496-12194089 nonsense_mediated_decay
  ENST00000533513 FAM86B1-030 12186454-12194073 protein_coding
  ENST00000533852 FAM86B1-023 12182556-12194070 protein_coding
  ENST00000534187 FAM86B1-008 12182110-12194105 nonsense_mediated_decay
  ENST00000534520 FAM86B1-001 12185149-12194127 protein_coding
  ENST00000534732 FAM86B1-035 12183453-12194050 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340537ENST00000431227ENST00000448228ENST00000524571ENST00000526708ENST00000529060ENST00000529146ENST00000530385ENST00000530508ENST00000531833ENST00000533852ENST00000534187ENST00000534520
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340537 N/A N/A N/A N/A N/A N/A N/A N/A 0.318±0.00 N/A N/A 1.804±0.00 0.088±0.00 0.585±0.00
ENST00000431227 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.164±0.00 N/A N/A N/A N/A
ENST00000448228 N/A N/A N/A N/A 0.105±0.00 0.354±0.00 0.149±0.00 N/A N/A 0.198±0.00 N/A 0.279±0.00 N/A N/A
ENST00000524571 0.180±0.00 N/A N/A N/A 0.164±0.00 N/A N/A N/A 0.137±0.00 N/A N/A N/A 0.069±0.00 0.284±0.00
ENST00000526708 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.173±0.00 N/A N/A
ENST00000529060 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.343±0.00 N/A N/A N/A N/A
ENST00000529146 0.331±0.00 1.299±0.00 N/A 0.733±0.00 0.206±0.00 0.098±0.00 0.153±0.00 0.330±0.00 0.046±0.00 N/A N/A 1.610±0.99 N/A 0.400±0.13
ENST00000530385 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.137±0.00 N/A 0.264±0.00 N/A N/A
ENST00000530508 N/A 0.579±0.00 N/A 0.378±0.00 0.148±0.01 0.122±0.04 N/A 0.083±0.00 N/A 0.167±0.02 0.144±0.00 0.755±0.40 N/A 0.345±0.12
ENST00000531833 N/A N/A N/A N/A N/A N/A N/A 0.436±0.00 1.230±0.00 N/A N/A N/A N/A 0.564±0.00
ENST00000533852 N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A N/A N/A 0.290±0.26 0.471±0.00 N/A N/A
ENST00000534187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.390±0.29 N/A
ENST00000534520 N/A N/A N/A N/A N/A N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007PQ CIL_0007PQ_0001 VISTA 8:11649159-12249913

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054950 fam86a family with sequence similarity 86, member A protein_coding Danio_rerio
ENSMUSG00000022544 Fam86 family with sequence similarity 86 protein_coding Mus_musculus

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