C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: family with sequence similarity 86
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000022544 Fam86 10090 - 16:5244152-5255983 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000064635 Fam86-001 5244152-5255983 protein_coding
  ENSMUST00000129729 Fam86-004 5247387-5248870 retained_intron
  ENSMUST00000132225 Fam86-002 5244879-5255941 retained_intron
  ENSMUST00000139584 Fam86-003 5247375-5255956 protein_coding
  ENSMUST00000140718 Fam86-005 5249075-5255929 retained_intron

Mus musculus EnsemblGRCm38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000064635ENSMUST00000139584
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000064635 15.217±2.14 24.914±4.22 15.098±0.64 4.583±1.25 17.486±2.78 14.563±1.22 6.953±1.21 19.560±1.74 6.693±1.97 15.415±0.82 3.585±0.23 13.782±5.68 10.046±1.97 6.527±0.27
ENSMUST00000139584 10.962±0.84 23.479±0.00 N/A N/A N/A 11.989±0.90 N/A N/A 11.497±0.00 N/A N/A 22.398±4.20 N/A 13.002±1.44

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002BU CIL_0002BU_0002 CGP 16:5211828-5244912
CIL_00046A CIL_00046A_0002 CGP 16:5233621-5255983
CIL_0000EQ CIL_0000EQ_0002 CGP 16:5244152-7412479

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054950 fam86a family with sequence similarity 86, member A protein_coding Danio_rerio
ENSG00000118894 FAM86A family with sequence similarity 86, member A protein_coding Homo_sapiens
ENSG00000145002 FAM86B2 family with sequence similarity 86, member B2 protein_coding Homo_sapiens
ENSG00000158483 FAM86C1 family with sequence similarity 86, member C1 protein_coding Homo_sapiens
ENSG00000186523 FAM86B1 family with sequence similarity 86, member B1 protein_coding Homo_sapiens

Loading