C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET and MYND domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186532 SMYD4 9606 - 17:1779485-1830634 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305513 SMYD4-001 1779485-1829881 protein_coding
  ENST00000476292 SMYD4-004 1783110-1783863 retained_intron
  ENST00000491788 SMYD4-002 1781692-1800805 protein_coding
  ENST00000570368 SMYD4-005 1800724-1829459 protein_coding
  ENST00000571854 SMYD4-003 1800862-1830634 protein_coding
  ENST00000573937 SMYD4-007 1804346-1829810 retained_intron
  ENST00000576633 SMYD4-006 1812062-1829810 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartLiverMuscleOvaryPlacentaTestisENST00000305513ENST00000491788
Transcript ID Bladder Brain Breast Colon Heart Liver Muscle Ovary Placenta Testis
ENST00000305513 0.332±0.00 2.658±0.00 0.637±0.00 0.864±0.00 3.283±0.00 0.934±0.00 N/A 2.527±1.23 1.832±0.55 3.852±0.00
ENST00000491788 N/A N/A 1.119±0.00 N/A 0.479±0.00 N/A 1.130±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060983 smyd4 SET and MYND domain containing 4 protein_coding Danio_rerio
ENSMUSG00000018809 Smyd4 SET and MYND domain containing 4 protein_coding Mus_musculus

Loading