C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SET and MYND domain containing 4
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000018809 Smyd4 10090 + 11:75348433-75405705 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000044530 Smyd4-001 75348433-75405705 protein_coding
  ENSMUST00000135774 Smyd4-003 75399609-75400633 processed_transcript
  ENSMUST00000145888 Smyd4-004 75387471-75390674 processed_transcript
  ENSMUST00000157055 Smyd4-002 75348495-75383018 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000044530ENSMUST00000135774ENSMUST00000157055
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000044530 1.982±0.58 1.601±0.97 3.716±0.72 2.354±1.01 1.234±0.55 1.219±0.20 0.850±0.41 3.387±0.22 1.010±0.43 1.877±0.27 1.236±0.17 2.562±1.11 1.584±0.59 0.581±0.24
ENSMUST00000135774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.943±0.00
ENSMUST00000157055 N/A N/A N/A 0.442±0.00 N/A N/A N/A N/A N/A N/A N/A 0.435±0.00 0.258±0.02 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093G CIL_00093G_0002 VISTA 11:74749027-75350435

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008168 IEA methyltransferase activity
GO:0032259 IEA methylation
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000060983 smyd4 SET and MYND domain containing 4 protein_coding Danio_rerio
ENSG00000186532 SMYD4 SET and MYND domain containing 4 protein_coding Homo_sapiens

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