C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BCDIN3 domain containing
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000186666 BCDIN3D 9606 - 12:49836039-49843129 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333924 BCDIN3D-001 49836039-49843129 protein_coding
  ENST00000550861 BCDIN3D-002 49838596-49843094 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333924
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333924 1.068±0.00 2.332±0.00 0.413±0.00 1.049±0.26 0.888±0.45 0.720±0.25 0.516±0.19 0.909±0.68 0.960±0.35 0.925±0.00 0.643±0.00 1.723±0.70 1.481±0.00 2.080±0.31

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00009W CIL_00009W_0001 CGP 12:49791146-49843129
CIL_0002BT CIL_0002BT_0001 CGP 12:49836039-49904217

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001510 IDA RNA methylation
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0008168 IEA methyltransferase activity
GO:0008171 IDA O-methyltransferase activity
GO:0008173 IDA RNA methyltransferase activity
GO:0010586 IDA miRNA metabolic process
GO:2000632 IDA negative regulation of pre-miRNA processing

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000074111 bcdin3d BCDIN3 domain containing protein_coding Danio_rerio
ENSMUSG00000037525 Bcdin3d BCDIN3 domain containing protein_coding Mus_musculus

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