C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00009W_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000167566-ENSG00000186666 CGP 9606 12:49791146-49843129
GeneTranscriptPositionBiotype
ENSG00000167566 (NCKAP5L)
NCK-associated protein 5-like 		ENST00000335999 (NCKAP5L-001) 49791146-49828425 protein_coding
ENST00000433948 (NCKAP5L-002) 49791146-49797002 protein_coding
ENST00000477361 (NCKAP5L-003) 49802268-49805719 retained_intron
ENST00000480927 (NCKAP5L-005) 49805938-49828750 processed_transcript
ENST00000491441 (NCKAP5L-004) 49802724-49805390 retained_intron
ENSG00000186666 (BCDIN3D)
BCDIN3 domain containing 		ENST00000333924 (BCDIN3D-001) 49836039-49843129 protein_coding
ENST00000550861 (BCDIN3D-002) 49838596-49843094 retained_intron
ENSG00000258057 (BCDIN3D-AS1)
BCDIN3D antisense RNA 1 		ENST00000548872 (BCDIN3D-AS1-001) 49828542-49841143 antisense
ENST00000549124 (BCDIN3D-AS1-004) 49828723-49840204 antisense
ENST00000551146 (BCDIN3D-AS1-002) 49828593-49832466 antisense
CIL_00009W_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000023009-ENSMUSG00000037525 CGP 10090 15:99422035-99474730
GeneTranscriptPositionBiotype
ENSMUSG00000023009 (Nckap5l)
NCK-associated protein 5-like 		ENSMUST00000023747 (Nckap5l-001) 99422035-99457748 protein_coding
ENSMUST00000160500 (Nckap5l-004) 99424015-99424533 processed_transcript
ENSMUST00000161004 (Nckap5l-003) 99423615-99424537 protein_coding
ENSMUST00000161948 (Nckap5l-002) 99429421-99457712 protein_coding
ENSMUSG00000037525 (Bcdin3d)
BCDIN3 domain containing 		ENSMUST00000040313 (Bcdin3d-201) 99470084-99474730 protein_coding
ENSMUSG00000089968 (Nckap5los)
NCK-associated protein 5-like, opposite strand 		ENSMUST00000159738 (Nckap5los-001) 99427701-99435313 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00009W_0001ENSG00000167566ENST00000335999ENST00000433948ENST00000477361ENST00000480927ENST00000491441ENSG00000186666ENST00000333924ENST00000550861ENSG00000258057ENST00000548872ENST00000549124ENST00000551146CIL_00009W_0002ENSMUSG00000023009ENSMUST00000023747ENSMUST00000160500ENSMUST00000161004ENSMUST00000161948ENSMUSG00000037525ENSMUST00000040313ENSMUSG00000089968ENSMUST00000159738
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00009W_0001ENSG00000167566ENST00000335999ENST00000433948ENST00000477361ENST00000491441ENSG00000186666ENST00000333924ENSG00000258057ENST00000548872CIL_00009W_0002ENSMUSG00000023009ENSMUST00000023747ENSMUST00000161948ENSMUSG00000037525ENSMUST00000040313ENSMUSG00000089968ENSMUST00000159738
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000167566 ENST00000335999 4.033±0.00 3.528±0.00 0.568±0.00 2.621±0.00 4.901±4.02 0.814±0.58 4.013±0.00 1.756±1.34 1.213±0.33 2.889±2.38 0.948±0.26 4.773±3.75 11.655±1.60 7.289±2.02
ENST00000433948 1.378±0.00 2.717±0.00 N/A 1.855±0.00 4.361±0.00 2.055±0.00 0.876±0.58 1.543±0.00 0.764±0.00 5.423±0.00 0.603±0.00 5.279±0.64 3.879±0.32 5.440±0.00
ENST00000477361 N/A N/A N/A N/A 0.376±0.00 0.572±0.00 N/A N/A 0.640±0.00 0.579±0.00 N/A 0.426±0.00 N/A N/A
ENST00000480927 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000491441 N/A N/A 0.579±0.00 N/A N/A N/A N/A 0.345±0.00 N/A N/A N/A N/A N/A N/A
ENSG00000186666 ENST00000333924 1.068±0.00 2.332±0.00 0.413±0.00 1.049±0.26 0.888±0.45 0.720±0.25 0.516±0.19 0.909±0.68 0.960±0.35 0.925±0.00 0.643±0.00 1.723±0.70 1.481±0.00 2.080±0.31
ENST00000550861 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000258057 ENST00000548872 N/A N/A N/A 0.708±0.00 N/A N/A N/A 0.135±0.00 N/A N/A 0.162±0.00 N/A N/A N/A
ENST00000549124 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000551146 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000023009 ENSMUST00000023747 2.194±1.25 7.644±2.39 1.809±0.43 6.092±2.91 1.848±1.02 0.767±0.12 0.595±0.26 0.728±0.29 0.268±0.18 2.721±0.88 0.522±0.11 5.527±1.89 4.116±2.32 2.186±0.00
ENSMUST00000160500 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161004 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000161948 N/A N/A N/A 16.369±0.00 3.662±0.00 N/A N/A N/A N/A N/A N/A 30.718±0.00 25.552±18.35 8.713±0.00
ENSMUSG00000037525 ENSMUST00000040313 1.382±0.33 2.955±0.91 2.956±0.46 4.595±1.66 3.191±1.28 3.528±0.96 0.920±0.34 2.995±0.41 1.809±0.66 1.907±0.64 2.298±0.96 4.598±1.36 5.053±1.97 1.977±0.39
ENSMUSG00000089968 ENSMUST00000159738 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.897±0.00

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