C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: SEC14 and spectrin domains 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187231 SESTD1 9606 - 2:179101692-179264790 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000335289 SESTD1-002 179109352-179149381 nonsense_mediated_decay
  ENST00000426988 SESTD1-009 179121794-179146459 nonsense_mediated_decay
  ENST00000428443 SESTD1-001 179101692-179264790 protein_coding
  ENST00000435047 SESTD1-005 179151332-179264203 protein_coding
  ENST00000440010 SESTD1-004 179151323-179264273 protein_coding
  ENST00000446758 SESTD1-003 179109322-179124467 nonsense_mediated_decay
  ENST00000452991 SESTD1-006 179174406-179264625 nonsense_mediated_decay
  ENST00000486468 SESTD1-007 179162483-179191866 processed_transcript
  ENST00000489901 SESTD1-008 179132045-179146459 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000335289ENST00000426988ENST00000428443ENST00000446758ENST00000489901
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000335289 19.339±0.00 2.788±0.00 3.343±0.00 6.591±2.14 11.439±7.21 2.303±0.00 1.541±0.86 2.323±0.86 0.670±0.00 8.798±0.00 0.687±0.34 2.419±0.17 2.947±0.65 6.809±0.81
ENST00000426988 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 24.050±0.00
ENST00000428443 N/A 1.393±0.00 N/A 3.723±0.75 4.076±1.13 2.090±1.14 0.624±0.43 1.693±0.00 1.517±1.29 2.229±0.50 0.348±0.28 3.816±3.91 2.437±1.50 2.927±0.24
ENST00000446758 N/A 2.388±0.00 N/A N/A 4.723±0.00 8.530±0.00 0.796±0.00 N/A 0.403±0.00 N/A N/A N/A 6.765±0.00 7.280±2.78
ENST00000489901 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.259±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C3 CIL_0004C3_0002 CGP 2:178829757-179264790
CIL_0004C4 CIL_0004C4_0002 CGP 2:179101692-179861505

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0010314 IDA phosphatidylinositol-5-phosphate binding
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0034704 IPI calcium channel complex
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0070273 IDA phosphatidylinositol-4-phosphate binding
GO:0070300 IDA phosphatidic acid binding
GO:0080025 IDA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000040614 sestd1 SEC14 and spectrin domains 1 protein_coding Danio_rerio
ENSMUSG00000042272 Sestd1 SEC14 and spectrin domains 1 protein_coding Mus_musculus

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