C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SEC14 and spectrin domains 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428443 SESTD1-001 ENSG00000187231 9606 - 2:179101692-179264790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000428443
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000428443 1.393±0.00 3.723±0.75 4.076±1.13 2.090±1.14 0.624±0.43 1.693±0.00 1.517±1.29 2.229±0.50 0.348±0.28 3.816±3.91 2.437±1.50 2.927±0.24

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004C3 CIL_0004C3_0002 CGP 2:178829757-179264790
CIL_0004C4 CIL_0004C4_0002 CGP 2:179101692-179861505

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005546 IDA phosphatidylinositol-4,5-bisphosphate binding
GO:0010314 IDA phosphatidylinositol-5-phosphate binding
GO:0032266 IDA phosphatidylinositol-3-phosphate binding
GO:0034704 IPI calcium channel complex
GO:0043325 IDA phosphatidylinositol-3,4-bisphosphate binding
GO:0070273 IDA phosphatidylinositol-4-phosphate binding
GO:0070300 IDA phosphatidic acid binding
GO:0080025 IDA phosphatidylinositol-3,5-bisphosphate binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102660 Sestd1-001 protein_coding Mus_musculus 0 3230
ENSMUST00000102659 Sestd1-002 protein_coding Mus_musculus 0 2937
ENSMUST00000139021 Sestd1-003 processed_transcript Mus_musculus 0 1384
ENSMUST00000145366 Sestd1-004 processed_transcript Mus_musculus 0 556

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