C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basal cell adhesion molecule (Lutheran blood group)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187244 BCAM 9606 + 19:44809059-44821420 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000270233 BCAM-001 44809103-44821414 protein_coding
  ENST00000588303 BCAM-004 44809115-44812046 retained_intron
  ENST00000588603 BCAM-007 44809130-44812953 retained_intron
  ENST00000588714 BCAM-010 44819247-44820060 retained_intron
  ENST00000589558 BCAM-009 44818531-44819244 retained_intron
  ENST00000589651 BCAM-002 44809071-44820595 protein_coding
  ENST00000590108 BCAM-008 44813148-44813667 retained_intron
  ENST00000590196 BCAM-005 44813438-44818802 nonsense_mediated_decay
  ENST00000590624 BCAM-011 44820333-44821416 retained_intron
  ENST00000591520 BCAM-006 44809121-44814304 protein_coding
  ENST00000611077 BCAM-201 44809059-44821420 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Gene structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000270233ENST00000589651ENST00000590196ENST00000591520
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000270233 70.693±0.00 38.986±0.00 8.246±0.00 3.216±3.07 45.616±43.58 47.225±0.00 25.279±23.17 194.036±0.00 5.973±1.88 49.376±43.65 11.835±8.28 58.674±45.80 122.613±20.88 42.245±31.29
ENST00000589651 N/A N/A 5.252±0.00 N/A N/A N/A N/A 1.558±0.00 0.870±0.00 8.209±6.71 N/A 6.096±4.89 18.995±0.00 2.583±0.00
ENST00000590196 N/A N/A N/A 3.356±2.69 N/A N/A N/A N/A N/A N/A 4.667±0.00 N/A N/A N/A
ENST00000591520 N/A N/A N/A 0.970±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004888 TAS transmembrane signaling receptor activity
GO:0005055 IMP laminin receptor activity
GO:0005515 IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007155 TAS cell adhesion
GO:0007160 IMP cell-matrix adhesion
GO:0007165 TAS signal transduction
GO:0009897 IC external side of plasma membrane
GO:0009986 IEA cell surface
GO:0043236 IMP laminin binding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070367 BCAM (1 of 2) basal cell adhesion molecule (Lutheran blood group) protein_coding Danio_rerio
ENSDARG00000090190 bcam basal cell adhesion molecule (Lutheran blood group) protein_coding Danio_rerio
ENSMUSG00000002980 Bcam basal cell adhesion molecule protein_coding Mus_musculus

Loading