C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: basal cell adhesion molecule
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000002980 Bcam 10090 - 7:19756131-19771016 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003061 Bcam-001 19756131-19770547 protein_coding
  ENSMUST00000133271 Bcam-002 19763673-19770495 retained_intron
  ENSMUST00000133427 Bcam-004 19766987-19770495 nonsense_mediated_decay
  ENSMUST00000135632 Bcam-005 19756557-19756951 retained_intron
  ENSMUST00000155244 Bcam-003 19765613-19771016 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003061
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003061 71.153±1.55 46.795±3.45 84.989±7.55 6.701±2.47 51.992±22.53 25.318±2.96 74.872±27.03 98.903±13.91 4.746±2.73 311.206±54.81 14.159±1.68 84.730±23.20 23.480±11.87 1.935±0.99

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005055 IDA laminin receptor activity
GO:0005886 IDA plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0007155 IDA cell adhesion
GO:0007160 IEA cell-matrix adhesion
GO:0009986 IDA cell surface
GO:0043236 IEA laminin binding
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000070367 BCAM (1 of 2) basal cell adhesion molecule (Lutheran blood group) protein_coding Danio_rerio
ENSDARG00000090190 bcam basal cell adhesion molecule (Lutheran blood group) protein_coding Danio_rerio
ENSG00000187244 BCAM basal cell adhesion molecule (Lutheran blood group) protein_coding Homo_sapiens

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