C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: round spermatid basic protein 1-like
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187257 RSBN1L 9606 + 7:77696443-77783022 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000334955 RSBN1L-001 77696443-77783022 protein_coding
  ENST00000441514 RSBN1L-007 77768661-77778818 protein_coding
  ENST00000445288 RSBN1L-002 77697151-77779682 protein_coding
  ENST00000445512 RSBN1L-004 77759595-77778611 protein_coding
  ENST00000462800 RSBN1L-006 77768355-77773353 retained_intron
  ENST00000468035 RSBN1L-005 77765491-77773446 retained_intron
  ENST00000614027 RSBN1L-201 77696443-77779686 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000334955ENST00000441514ENST00000445512ENST00000468035ENST00000614027
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000334955 3.006±0.00 3.960±0.00 N/A 2.832±0.86 2.373±0.31 2.398±0.68 0.953±0.41 2.100±0.53 2.706±1.16 2.858±0.53 1.229±1.14 2.917±0.56 1.356±0.51 4.994±3.08
ENST00000441514 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.762±0.00 9.398±0.32 N/A 19.077±0.00
ENST00000445512 N/A N/A N/A N/A N/A N/A N/A 2.774±0.00 12.066±0.00 N/A N/A N/A N/A N/A
ENST00000468035 N/A N/A N/A 7.042±0.00 8.710±0.00 N/A N/A 3.341±0.00 N/A 12.564±0.00 N/A N/A N/A N/A
ENST00000614027 N/A 2.153±0.00 1.359±0.00 0.594±0.00 0.879±0.00 0.951±0.00 N/A 1.275±0.00 N/A 1.213±0.00 0.229±0.00 2.589±0.66 2.633±2.17 7.454±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000862 CIL_000862_0001 VISTA 7:77397445-77998455

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000039968 Rsbn1l round spermatid basic protein 1-like protein_coding Mus_musculus

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