C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: histone cluster 1, H1t
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187475 HIST1H1T 9606 - 6:26107419-26108136 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338379 HIST1H1T-001 26107419-26108136 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartLungOvaryPlacentaTestisENST00000338379
Transcript ID Bladder Heart Lung Ovary Placenta Testis
ENST00000338379 0.375±0.00 0.022±0.00 0.719±0.00 0.064±0.00 0.053±0.02 0.761±0.49

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001C0 CIL_0001C0_0004 CGP 6:26107419-26123926

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0000794 IEA condensed nuclear chromosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0006334 IEA nucleosome assembly
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0007339 IEA binding of sperm to zona pellucida
GO:0030154 IEA cell differentiation
GO:0030317 IEA sperm motility

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000032637 si:dkey-261m9.12 si:dkey-261m9.12 protein_coding Danio_rerio
ENSDARG00000035519 histh1l histone H1 like protein_coding Danio_rerio
ENSDARG00000051718 si:ch211-113a14.24 si:ch211-113a14.24 protein_coding Danio_rerio
ENSDARG00000051735 si:ch211-113a14.18 si:ch211-113a14.18 protein_coding Danio_rerio
ENSDARG00000058479 zgc:110425 zgc:110425 protein_coding Danio_rerio
ENSDARG00000074012 FP325123.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000075508 si:dkey-108k21.10 si:dkey-108k21.10 protein_coding Danio_rerio
ENSDARG00000075538 zgc:163061 zgc:163061 protein_coding Danio_rerio
ENSDARG00000076766 zgc:163061 zgc:163061 protein_coding Danio_rerio
ENSDARG00000077456 si:ch211-113a14.12 si:ch211-113a14.12 protein_coding Danio_rerio
ENSDARG00000077504 si:ch211-103n10.5 si:ch211-103n10.5 protein_coding Danio_rerio
ENSDARG00000088889 si:dkey-108k21.14 si:dkey-108k21.14 protein_coding Danio_rerio
ENSDARG00000090426 CU457819.3 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000091905 si:dkey-108k21.21 si:dkey-108k21.21 protein_coding Danio_rerio
ENSDARG00000092395 CABZ01086354.1 Uncharacterized protein protein_coding Danio_rerio
ENSDARG00000096992 zgc:153405 zgc:153405 protein_coding Danio_rerio
ENSMUSG00000036211 Hist1h1t histone cluster 1, H1t protein_coding Mus_musculus

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