C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001C0_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000091905-ENSDARG00000051778 CGP 7955 25:36164187-36167557
GeneTranscriptPositionBiotype
ENSDARG00000051778 (zgc:194989)
zgc:194989 		ENSDART00000073457 (zgc:194989-001) 36167071-36167557 protein_coding
ENSDARG00000091905 (si:dkey-108k21.21)
si:dkey-108k21.21 		ENSDART00000133747 (si:dkey-108k21.21-201) 36164360-36164857 protein_coding
ENSDART00000156727 (si:dkey-108k21.21-001) 36164187-36164903 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001C0_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000092395-ENSDARG00000076129 CGP 7955 25:36182655-36185776
GeneTranscriptPositionBiotype
ENSDARG00000076129 (CABZ01086354.1)
Histone H2B 		ENSDART00000114767 (CABZ01086354.1-201) 36184799-36185776 protein_coding
ENSDARG00000092395 (CABZ01086354.1)
Uncharacterized protein 		ENSDART00000137502 (CABZ01086354.1-201) 36182655-36183146 protein_coding

Danio rerio Ensembl (Zv9)

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CIL_0001C0_0003 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000168298-ENSG00000158373 CGP 9606 6:26156391-26171349
GeneTranscriptPositionBiotype
ENSG00000158373 (HIST1H2BD)
histone cluster 1, H2bd 		ENST00000289316 (HIST1H2BD-001) 26158146-26171349 protein_coding
ENST00000377777 (HIST1H2BD-002) 26158146-26158641 protein_coding
ENSG00000168298 (HIST1H1E)
histone cluster 1, H1e 		ENST00000304218 (HIST1H1E-001) 26156391-26157050 protein_coding
ENSG00000217159 (LARP1P1)
La ribonucleoprotein domain family, member 1 pseudogene 1 		ENST00000407692 (LARP1P1-001) 26164072-26164363 processed_pseudogene

Homo sapiens Ensembl (GRCh38)

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CIL_0001C0_0004 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187475-ENSG00000180596 CGP 9606 6:26107419-26123926
GeneTranscriptPositionBiotype
ENSG00000180596 (HIST1H2BC)
histone cluster 1, H2bc 		ENST00000314332 (HIST1H2BC-003) 26114873-26123910 protein_coding
ENST00000396984 (HIST1H2BC-002) 26123356-26123926 protein_coding
ENSG00000187475 (HIST1H1T)
histone cluster 1, H1t 		ENST00000338379 (HIST1H1T-001) 26107419-26108136 protein_coding

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001C0_0001ENSDARG00000051778ENSDART00000073457ENSDARG00000091905ENSDART00000133747ENSDART00000156727CIL_0001C0_0002ENSDARG00000076129ENSDART00000114767ENSDARG00000092395ENSDART00000137502CIL_0001C0_0003ENSG00000158373ENST00000289316ENST00000377777ENSG00000168298ENST00000304218ENSG00000217159ENST00000407692CIL_0001C0_0004ENSG00000180596ENST00000314332ENST00000396984ENSG00000187475ENST00000338379
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001C0_0001ENSDARG00000051778ENSDART00000073457ENSDARG00000091905ENSDART00000133747CIL_0001C0_0002ENSDARG00000076129ENSDART00000114767ENSDARG00000092395ENSDART00000137502CIL_0001C0_0003ENSG00000158373ENST00000289316ENST00000377777ENSG00000168298ENST00000304218ENSG00000217159ENST00000407692CIL_0001C0_0004ENSG00000180596ENST00000314332ENST00000396984ENSG00000187475ENST00000338379
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000051778 ENSDART00000073457 N/A N/A N/A N/A N/A N/A 1.071±0.65 N/A 0.078±0.00 N/A 0.263±0.00 N/A N/A N/A
ENSDARG00000091905 ENSDART00000133747 N/A N/A N/A N/A N/A N/A N/A 0.332±0.00 0.089±0.00 N/A 0.404±0.00 N/A N/A N/A
ENSDART00000156727 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000076129 ENSDART00000114767 N/A N/A N/A 0.208±0.00 N/A N/A 0.416±0.09 N/A N/A N/A 0.181±0.00 N/A N/A N/A
ENSDARG00000092395 ENSDART00000137502 N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000158373 ENST00000289316 0.298±0.00 N/A 2.581±0.00 1.918±0.46 2.149±0.00 9.445±0.00 8.033±4.30 4.666±1.96 16.102±0.00 4.710±0.00 2.939±0.51 9.591±3.76 7.825±2.77 4.924±0.54
ENST00000377777 0.821±0.00 31.389±0.00 27.085±0.00 9.584±7.68 37.930±36.54 60.927±56.78 13.671±0.00 21.386±0.00 51.497±0.00 38.253±25.87 1.603±0.00 43.477±36.77 3.253±0.00 2.414±0.00
ENSG00000168298 ENST00000304218 0.950±0.00 N/A 23.894±0.00 22.745±22.47 38.758±38.07 27.078±26.61 10.443±10.39 19.119±18.54 21.276±21.22 17.592±16.43 16.822±0.00 18.873±31.67 0.546±0.19 0.421±0.10
ENSG00000217159 ENST00000407692 N/A N/A N/A N/A N/A N/A 0.215±0.00 N/A N/A 0.315±0.00 N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000180596 ENST00000314332 0.568±0.00 0.843±0.00 N/A 1.263±0.00 1.389±0.00 0.278±0.00 1.186±0.00 0.554±0.00 4.551±0.00 5.754±0.00 1.646±0.07 1.402±0.24 4.531±1.49 2.888±0.79
ENST00000396984 0.727±0.00 2.955±0.00 25.188±0.00 21.904±21.19 71.886±0.00 60.762±60.51 9.559±9.29 18.329±16.53 76.649±0.00 72.888±0.00 2.382±0.00 123.181±0.00 N/A N/A
ENSG00000187475 ENST00000338379 N/A N/A 0.375±0.00 N/A N/A N/A 0.022±0.00 N/A N/A 0.719±0.00 N/A 0.064±0.00 0.053±0.02 0.761±0.49

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