C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 2 open reading frame 88
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187699 C2orf88 9606 + 2:189879609-190203484 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000340623 C2orf88-004 190180863-190203484 protein_coding
  ENST00000396974 C2orf88-003 190137760-190200479 protein_coding
  ENST00000409545 C2orf88-009 190150246-190200063 protein_coding
  ENST00000409870 C2orf88-008 190180482-190200209 protein_coding
  ENST00000443551 C2orf88-005 190180955-190200214 protein_coding
  ENST00000450357 C2orf88-007 190089576-190199950 protein_coding
  ENST00000478197 C2orf88-002 189879609-190079570 processed_transcript
  ENST00000490033 C2orf88-006 190089541-190199827 processed_transcript
  ENST00000495546 C2orf88-001 189879627-190164051 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000340623ENST00000396974ENST00000409870ENST00000443551
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000340623 0.395±0.00 0.623±0.00 0.410±0.00 3.490±0.00 1.817±0.00 2.625±0.61 2.536±0.86 1.317±0.98 0.941±0.04 0.166±0.00 2.468±0.00 0.740±0.15 0.749±0.32 3.162±1.43
ENST00000396974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.282±1.75
ENST00000409870 N/A N/A 1.238±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443551 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.584±0.00 N/A N/A 1.009±0.00 19.121±6.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002KB CIL_0002KB_0001 CGP 2:189879609-190203484

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005886 IEA plasma membrane
GO:0034237 IEA protein kinase A regulatory subunit binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000043629 1700019D03Rik RIKEN cDNA 1700019D03 gene protein_coding Mus_musculus

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