C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002KB_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000187699-ENSG00000187699 CGP 9606 2:189879609-190203484
GeneTranscriptPositionBiotype
ENSG00000138379 (MSTN)
myostatin 		ENST00000260950 (MSTN-001) 190055697-190062729 protein_coding
ENSG00000187699 (C2orf88)
chromosome 2 open reading frame 88 		ENST00000340623 (C2orf88-004) 190180863-190203484 protein_coding
ENST00000396974 (C2orf88-003) 190137760-190200479 protein_coding
ENST00000409545 (C2orf88-009) 190150246-190200063 protein_coding
ENST00000409870 (C2orf88-008) 190180482-190200209 protein_coding
ENST00000443551 (C2orf88-005) 190180955-190200214 protein_coding
ENST00000450357 (C2orf88-007) 190089576-190199950 protein_coding
ENST00000478197 (C2orf88-002) 189879609-190079570 processed_transcript
ENST00000490033 (C2orf88-006) 190089541-190199827 processed_transcript
ENST00000495546 (C2orf88-001) 189879627-190164051 processed_transcript
ENSG00000198130 (HIBCH)
3-hydroxyisobutyryl-CoA hydrolase 		ENST00000359678 (HIBCH-001) 190204634-190320045 protein_coding
ENST00000392332 (HIBCH-010) 190203921-190319890 protein_coding
ENST00000392333 (HIBCH-009) 190244902-190290485 nonsense_mediated_decay
ENST00000399855 (HIBCH-014) 190189735-190205232 protein_coding
ENST00000409820 (HIBCH-008) 190208880-190250503 protein_coding
ENST00000409934 (HIBCH-002) 190252166-190344193 protein_coding
ENST00000410045 (HIBCH-007) 190205015-190250513 protein_coding
ENST00000414928 (HIBCH-005) 190251492-190252296 nonsense_mediated_decay
ENST00000416732 (HIBCH-012) 190208676-190246215 protein_coding
ENST00000485992 (HIBCH-006) 190245302-190281068 processed_transcript
ENST00000486981 (HIBCH-013) 190204635-190220450 processed_transcript
ENST00000489147 (HIBCH-011) 190208685-190216109 retained_intron
ENST00000489269 (HIBCH-003) 190252239-190281097 processed_transcript
ENST00000495792 (HIBCH-004) 190260473-190281093 processed_transcript
ENST00000622246 (HIBCH-201) 190205014-190319797 protein_coding
ENSG00000204253 (HNRNPCP2)
heterogeneous nuclear ribonucleoprotein C pseudogene 2 		ENST00000399515 (HNRNPCP2-001) 189923336-189924216 processed_pseudogene
ENSG00000213110 (AC019178.2)
 ENST00000392337 (AC019178.2-001) 189930277-189931010 processed_pseudogene
ENSG00000223824 (AC019178.3)
 ENST00000423595 (AC019178.3-001) 189917254-189917758 processed_pseudogene
CIL_0002KB_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000043629-ENSMUSG00000026100 CGP 10090 1:52922324-53068079
GeneTranscriptPositionBiotype
ENSMUSG00000026100 (Mstn)
myostatin 		ENSMUST00000027269 (Mstn-001) 53061640-53068079 protein_coding
ENSMUST00000191197 (Mstn-002) 53061657-53068045 protein_coding
ENSMUSG00000043629 (1700019D03Rik)
RIKEN cDNA 1700019D03 gene 		ENSMUST00000050567 (1700019D03Rik-002) 52922324-52952844 protein_coding
ENSMUST00000114492 (1700019D03Rik-003) 52922324-52953350 protein_coding
ENSMUST00000114493 (1700019D03Rik-001) 52922324-52963260 protein_coding
ENSMUST00000186266 (1700019D03Rik-004) 52925188-52972046 protein_coding
ENSMUST00000190726 (1700019D03Rik-006) 52925198-52992656 protein_coding
ENSMUST00000190831 (1700019D03Rik-005) 52925187-52992655 protein_coding
ENSMUST00000191441 (1700019D03Rik-007) 52925183-53020179 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KB_0001ENSG00000138379ENST00000260950ENSG00000187699ENST00000340623ENST00000396974ENST00000409545ENST00000409870ENST00000443551ENST00000450357ENST00000478197ENST00000490033ENST00000495546ENSG00000198130ENST00000359678ENST00000392332ENST00000392333ENST00000399855ENST00000409820ENST00000409934ENST00000410045ENST00000414928ENST00000416732ENST00000485992ENST00000486981ENST00000489147ENST00000489269ENST00000495792ENST00000622246ENSG00000204253ENST00000399515ENSG00000213110ENST00000392337ENSG00000223824ENST00000423595CIL_0002KB_0002ENSMUSG00000026100ENSMUST00000027269ENSMUST00000191197ENSMUSG00000043629ENSMUST00000050567ENSMUST00000114492ENSMUST00000114493ENSMUST00000186266ENSMUST00000190726ENSMUST00000190831ENSMUST00000191441
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002KB_0001ENSG00000138379ENST00000260950ENSG00000187699ENST00000340623ENST00000396974ENST00000409870ENST00000443551ENSG00000198130ENST00000359678ENST00000392332ENST00000622246ENSG00000204253ENST00000399515ENSG00000213110ENST00000392337ENSG00000223824ENST00000423595CIL_0002KB_0002ENSMUSG00000026100ENSMUST00000027269ENSMUST00000191197ENSMUSG00000043629ENSMUST00000050567ENSMUST00000114492ENSMUST00000114493ENSMUST00000186266ENSMUST00000190726ENSMUST00000190831ENSMUST00000191441
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000138379 ENST00000260950 0.037±0.00 0.220±0.00 0.201±0.00 0.106±0.06 0.384±0.00 0.036±0.01 0.015±0.01 0.112±0.00 0.015±0.00 0.025±0.00 0.153±0.05 0.072±0.05 0.019±0.01 0.095±0.02
ENSG00000187699 ENST00000340623 0.395±0.00 0.623±0.00 0.410±0.00 3.490±0.00 1.817±0.00 2.625±0.61 2.536±0.86 1.317±0.98 0.941±0.04 0.166±0.00 2.468±0.00 0.740±0.15 0.749±0.32 3.162±1.43
ENST00000396974 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.282±1.75
ENST00000409545 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409870 N/A N/A 1.238±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443551 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.584±0.00 N/A N/A 1.009±0.00 19.121±6.93
ENST00000450357 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000490033 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495546 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198130 ENST00000359678 5.785±0.00 4.865±0.00 4.867±0.00 3.790±0.23 8.408±3.06 6.012±2.19 2.729±0.84 14.561±7.89 6.756±3.64 3.072±0.52 1.388±0.23 6.086±2.05 3.169±0.75 8.525±0.53
ENST00000392332 N/A N/A 1.580±0.00 1.342±0.00 N/A 2.856±0.00 0.498±0.00 4.305±0.00 N/A 2.489±0.00 0.411±0.00 4.691±0.00 N/A N/A
ENST00000392333 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000399855 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409820 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000409934 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000410045 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000414928 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000416732 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485992 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000486981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489147 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000489269 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000495792 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622246 N/A N/A 2.607±0.00 N/A 6.744±0.00 2.867±0.41 3.170±0.00 6.456±0.00 4.081±1.54 N/A 1.467±0.00 3.630±0.00 4.032±0.67 N/A
ENSG00000204253 ENST00000399515 0.031±0.00 0.049±0.00 N/A 0.017±0.00 0.105±0.05 0.162±0.13 0.245±0.00 0.083±0.07 0.086±0.06 0.028±0.00 0.015±0.00 0.327±0.35 0.227±0.11 0.398±0.38
ENSG00000213110 ENST00000392337 N/A 0.063±0.00 N/A N/A N/A N/A N/A N/A N/A 0.026±0.00 0.026±0.00 N/A N/A 0.263±0.00
ENSG00000223824 ENST00000423595 N/A N/A N/A 0.019±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.022±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000026100 ENSMUST00000027269 0.127±0.03 N/A 0.112±0.00 0.081±0.01 14.556±1.72 0.045±0.00 0.313±0.17 0.138±0.02 0.031±0.04 0.233±0.07 20.889±4.43 0.006±0.00 0.044±0.02 0.044±0.02
ENSMUST00000191197 0.067±0.00 N/A N/A 0.098±0.00 N/A N/A N/A 0.022±0.00 0.009±0.00 N/A N/A N/A N/A 0.029±0.00
ENSMUSG00000043629 ENSMUST00000050567 0.795±0.17 0.558±0.22 3.957±0.55 0.661±0.31 2.406±0.28 3.593±0.58 0.482±0.12 0.196±0.04 2.353±0.62 0.480±0.09 0.066±0.00 0.234±0.12 0.911±0.47 N/A
ENSMUST00000114492 N/A N/A 1.682±0.00 0.330±0.20 2.637±0.00 0.440±0.00 N/A 0.461±0.19 0.371±0.11 0.191±0.07 0.044±0.00 N/A 1.000±0.05 N/A
ENSMUST00000114493 0.188±0.00 0.266±0.11 N/A N/A N/A N/A 0.210±0.00 N/A 0.118±0.04 N/A N/A 0.204±0.08 N/A 5.658±2.10
ENSMUST00000186266 0.573±0.00 N/A N/A N/A N/A 2.173±0.00 N/A 0.761±0.13 0.219±0.00 N/A N/A 0.254±0.00 0.879±0.32 159.511±63.29
ENSMUST00000190726 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.342±0.00 N/A N/A
ENSMUST00000190831 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 64.393±9.06
ENSMUST00000191441 N/A N/A N/A N/A N/A N/A 0.710±0.00 N/A N/A N/A N/A 0.406±0.00 N/A N/A

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