C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: solute carrier family 18 (vesicular acetylcholine transporter), member 3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187714 SLC18A3 9606 + 10:49610301-49612720 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000374115 SLC18A3-001 49610301-49612720 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartLungPlacentaTestisENST00000374115
Transcript ID Breast Colon Heart Lung Placenta Testis
ENST00000374115 0.048±0.00 0.594±0.00 0.037±0.00 0.019±0.00 1.499±0.45 0.089±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084A CIL_00084A_0001 VISTA 10:49095759-49697208
CIL_0006F1 CIL_0006F1_0002 CGP 10:49609095-49665104

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005277 TAS acetylcholine transmembrane transporter activity
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0007268 TAS synaptic transmission
GO:0007269 TAS neurotransmitter secretion
GO:0015870 TAS acetylcholine transport
GO:0016020 TAS membrane
GO:0016021 IEA integral component of membrane
GO:0022857 IEA transmembrane transporter activity
GO:0055085 IEA transmembrane transport
GO:0060201 TAS clathrin-sculpted acetylcholine transport vesicle membrane
GO:0098655 TAS cation transmembrane transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006356 slc18a3a solute carrier family 18 (vesicular acetylcholine), member 3a protein_coding Danio_rerio
ENSDARG00000090189 CABZ01112647.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000100241 Slc18a3 solute carrier family 18 (vesicular monoamine), member 3 protein_coding Mus_musculus

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