C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: helt bHLH transcription factor
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000187821 HELT 9606 + 4:185018841-185020804 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000338875 HELT-004 185018929-185020772 protein_coding
  ENST00000505610 HELT-001 185018841-185020804 protein_coding
  ENST00000513599 HELT-003 185018841-185020802 retained_intron
  ENST00000515777 HELT-002 185018841-185020796 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyLungTestisENST00000338875ENST00000505610ENST00000513599ENST00000515777
Transcript ID Brain Kidney Lung Testis
ENST00000338875 N/A N/A 0.122±0.00 0.065±0.00
ENST00000505610 0.031±0.00 N/A 0.596±0.00 0.106±0.00
ENST00000513599 N/A 0.211±0.00 N/A N/A
ENST00000515777 0.027±0.00 N/A N/A 0.093±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000Z8 CIL_0000Z8_0002 CGP 4:184755595-185020804

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 IEA negative regulation of transcription from RNA polymerase II promoter
GO:0001967 IEA suckling behavior
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0005667 IEA transcription factor complex
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0007417 IEA central nervous system development
GO:0009791 IEA post-embryonic development
GO:0010259 IEA multicellular organismal aging
GO:0010467 IEA gene expression
GO:0021858 IEA GABAergic neuron differentiation in basal ganglia
GO:0030182 IEA neuron differentiation
GO:0035264 IEA multicellular organism growth
GO:0042803 IEA protein homodimerization activity
GO:0045944 IEA positive regulation of transcription from RNA polymerase II promoter
GO:0046983 IEA protein dimerization activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056400 helt hey-like transcription factor protein_coding Danio_rerio
ENSMUSG00000047171 Helt helt bHLH transcription factor protein_coding Mus_musculus

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