C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hemoglobin, alpha 2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188536 HBA2 9606 + 16:172847-173710 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000251595 HBA2-001 172847-173710 protein_coding
  ENST00000397806 HBA2-002 172890-173710 protein_coding
  ENST00000482565 HBA2-003 172894-173675 retained_intron
  ENST00000484216 HBA2-006 172944-173463 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000397806ENST00000482565
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000397806 40.230±0.00 28.675±0.00 3.524±0.00 4.056±1.97 90.207±84.17 275.868±274.66 3.303±1.24 1.963±1.85 9.480±7.52 14.337±0.00 2.870±1.65 14.887±21.66 2065.109±1316.27 84.115±81.18
ENST00000482565 16.080±0.00 11.362±0.00 N/A 3.643±0.00 106.013±0.00 N/A 1.372±0.00 0.499±0.00 N/A N/A 0.827±0.00 0.421±0.00 65.842±0.00 0.618±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0001 VISTA 16:-195470-405616
CIL_0008HK CIL_0008HK_0001 VISTA 16:-187027-414801

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004601 IDA peroxidase activity
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005515 IPI protein binding
GO:0005576 TAS extracellular region
GO:0005829 TAS cytosol
GO:0005833 IEA:IDA hemoglobin complex
GO:0010942 IDA positive regulation of cell death
GO:0015671 IEA:TAS oxygen transport
GO:0015701 TAS bicarbonate transport
GO:0016020 IDA membrane
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding
GO:0022627 IDA cytosolic small ribosomal subunit
GO:0031720 IDA haptoglobin binding
GO:0031838 IDA haptoglobin-hemoglobin complex
GO:0042542 IDA response to hydrogen peroxide
GO:0042744 IDA hydrogen peroxide catabolic process
GO:0044281 TAS small molecule metabolic process
GO:0051291 IDA protein heterooligomerization
GO:0055114 IDA oxidation-reduction process
GO:0070062 IDA extracellular vesicular exosome
GO:0071682 TAS endocytic vesicle lumen
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000069917 Hba-a2 hemoglobin alpha, adult chain 2 protein_coding Mus_musculus
ENSMUSG00000069919 Hba-a1 hemoglobin alpha, adult chain 1 protein_coding Mus_musculus

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