C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: hemoglobin alpha, adult chain 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000069919 Hba-a1 10090 + 11:32283511-32284465 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000093209 Hba-a1-001 32283511-32284465 protein_coding
  ENSMUST00000142555 Hba-a1-002 32283811-32284438 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000093209ENSMUST00000142555
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000093209 3.964±1.04 30.240±12.70 22.811±21.29 574.927±416.36 7.326±0.00 9.377±5.65 21.490±3.87 30.626±9.19 19.394±3.42 117.559±52.85 2.426±0.90 6.642±3.27 N/A 0.973±0.08
ENSMUST00000142555 48.991±14.31 79.710±4.23 11.881±1.94 174.902±122.02 63.108±34.02 43.751±29.00 206.716±4.83 174.447±33.34 42.447±17.18 889.754±515.34 16.706±5.57 21.383±16.50 3750.635±4883.46 2.754±1.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344
CIL_0003GE CIL_0003GE_0003 CGP 11:32283511-32287784

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005344 IEA oxygen transporter activity
GO:0005506 IEA iron ion binding
GO:0005833 IEA hemoglobin complex
GO:0015671 IEA oxygen transport
GO:0019825 IEA oxygen binding
GO:0020037 IEA heme binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000188536 HBA2 hemoglobin, alpha 2 protein_coding Homo_sapiens
ENSG00000206172 HBA1 hemoglobin, alpha 1 protein_coding Homo_sapiens

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