C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cilia and flagella associated 54
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188596 C12orf55 9606 + 12:96489571-96875555 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000342887 C12orf55-009 96647975-96765270 retained_intron
  ENST00000524981 C12orf55-003 96489587-96875555 protein_coding
  ENST00000550977 C12orf55-004 96621712-96647127 protein_coding
  ENST00000553778 C12orf55-002 96489575-96538668 non_stop_decay
  ENST00000554108 C12orf55-008 96540137-96644210 processed_transcript
  ENST00000554621 C12orf55-005 96489571-96501201 retained_intron
  ENST00000554821 C12orf55-006 96547927-96554968 retained_intron
  ENST00000556591 C12orf55-007 96554187-96576698 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000342887ENST00000524981ENST00000550977ENST00000553778ENST00000554108ENST00000554821
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000342887 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A 1.250±0.39
ENST00000524981 N/A N/A N/A 0.114±0.01 N/A 0.096±0.07 N/A N/A 0.125±0.00 0.866±0.00 N/A 0.106±0.07 0.017±0.00 1.293±0.00
ENST00000550977 0.220±0.00 0.684±0.00 0.659±0.00 0.649±0.16 1.232±0.86 0.409±0.24 0.275±0.00 0.417±0.06 0.547±0.40 N/A 0.099±0.05 0.689±0.17 0.202±0.08 1.427±0.00
ENST00000553778 N/A N/A 0.251±0.00 N/A 0.161±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000554108 N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000554821 0.436±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000078192 C4H12orf55 cilia and flagella associated 54 protein_coding Danio_rerio
ENSMUSG00000020014 4930485B16Rik cilia and flagella associated protein 54 protein_coding Mus_musculus

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