C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: shisa family member 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000188803 SHISA6 9606 + 17:11241263-11564063 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000343478 SHISA6-004 11241941-11380461 protein_coding
  ENST00000409168 SHISA6-002 11241423-11564063 protein_coding
  ENST00000432116 SHISA6-003 11241263-11564063 protein_coding
  ENST00000441885 SHISA6-001 11241263-11564063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000343478ENST00000409168ENST00000432116ENST00000441885
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000343478 N/A 0.053±0.00 N/A N/A N/A N/A 0.195±0.00 N/A 0.180±0.00 0.050±0.00 0.177±0.00 0.188±0.01 N/A 1.522±0.17
ENST00000409168 0.345±0.00 N/A N/A 1.596±0.00 0.108±0.09 0.252±0.10 N/A N/A N/A 0.098±0.02 0.105±0.04 0.172±0.02 0.029±0.01 N/A
ENST00000432116 N/A 0.089±0.00 N/A 1.007±0.46 N/A N/A 0.114±0.09 0.885±0.00 N/A N/A N/A 0.259±0.00 N/A 0.999±0.00
ENST00000441885 N/A N/A 0.306±0.00 1.293±0.00 N/A N/A N/A N/A 0.235±0.00 N/A N/A N/A N/A 0.487±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Q9 CIL_0003Q9_0002 CGP 17:11241263-11969748

Gene Ontology
GO IDEvidence TypeGO Description
GO:0032281 IEA alpha-amino-3-hydroxy-5-methyl-4-isoxazolepropionic acid selective glutamate receptor complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000086475 shisa family member 6 protein_coding Danio_rerio
ENSDARG00000087598 CABZ01100326.1 Uncharacterized protein protein_coding Danio_rerio
ENSMUSG00000053930 Shisa6 shisa family member 6 protein_coding Mus_musculus

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