C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: shisa family member 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000409168 SHISA6-002 ENSG00000188803 9606 + 17:11241423-11564063 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonLungMuscleOvaryPlacentaENST00000409168
Transcript ID Adipose Brain Breast Colon Lung Muscle Ovary Placenta
ENST00000409168 0.345±0.00 1.596±0.00 0.108±0.09 0.252±0.10 0.098±0.02 0.105±0.04 0.172±0.02 0.029±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003Q9 CIL_0003Q9_0002 CGP 17:11241263-11969748

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000123454 Shisa6-002 protein_coding Mus_musculus 0 1050
ENSMUST00000066679 Shisa6-201 protein_coding Mus_musculus 0 1016
ENSMUST00000134562 Shisa6-001 processed_transcript Mus_musculus 0 246
ENSMUST00000108908 Scn8a-203 protein_coding Mus_musculus 0.00004 57
ENSMUST00000108909 Scn8a-204 protein_coding Mus_musculus 0.00004 57
ENSMUST00000108910 Scn8a-205 protein_coding Mus_musculus 0.00004 57
ENSMUST00000082209 Scn8a-201 protein_coding Mus_musculus 0.00004 57
ENSMUST00000006311 Tead4-001 protein_coding Mus_musculus 0.0005 53

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