C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PAX8 antisense RNA 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000189223 PAX8-AS1 9606 + 2:113211522-113276581 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000333145 PAX8-AS1-001 113235540-113267004 antisense
  ENST00000422956 PAX8-AS1-002 113235536-113276581 antisense
  ENST00000431844 PAX8-AS1-007 113235540-113236357 antisense
  ENST00000436293 PAX8-AS1-006 113236269-113267010 antisense
  ENST00000437551 PAX8-AS1-004 113235527-113241410 antisense
  ENST00000445745 PAX8-AS1-005 113236237-113267010 antisense
  ENST00000451179 PAX8-AS1-003 113235530-113266170 antisense
  ENST00000456685 PAX8-AS1-008 113211522-113239690 antisense
  ENST00000510859 PAX8-AS1-009 113250766-113266973 antisense
  ENST00000553869 PAX8-AS1-013 113235540-113263362 antisense
  ENST00000555766 PAX8-AS1-010 113237534-113239908 retained_intron
  ENST00000556070 PAX8-AS1-012 113235536-113265830 antisense
  ENST00000609210 PAX8-AS1-014 113255390-113273699 antisense
  ENST00000616073 PAX8-AS1-011 113235540-113265509 antisense
  ENST00000617278 PAX8-AS1-015 113259148-113263409 retained_intron
  ENST00000617509 PAX8-AS1-016 113235530-113259579 antisense
  ENST00000623031 PAX8-AS1-019 113263362-113273164 antisense
  ENST00000623306 PAX8-AS1-018 113235425-113263334 antisense
  ENST00000624706 PAX8-AS1-017 113235545-113255534 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000333145ENST00000422956ENST00000437551ENST00000445745ENST00000451179ENST00000510859ENST00000555766
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000333145 1.773±0.00 N/A 3.065±1.74 N/A 0.028±0.00 1.749±1.23 0.396±0.00 1.708±0.90 3.342±2.05 0.421±0.00 3.724±0.00 3.839±0.93 5.889±1.27
ENST00000422956 0.197±0.00 N/A 0.265±0.16 0.030±0.00 0.384±0.00 N/A N/A 0.095±0.00 0.480±0.00 N/A 1.373±0.69 N/A N/A
ENST00000437551 N/A 3.066±0.00 N/A 0.318±0.00 N/A 1.720±0.00 N/A 1.757±0.00 3.625±0.00 0.511±0.00 12.250±6.65 4.264±1.39 4.553±0.00
ENST00000445745 N/A N/A N/A 0.281±0.00 N/A N/A N/A N/A N/A N/A 3.760±0.00 4.269±0.00 N/A
ENST00000451179 N/A N/A 1.559±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 7.069±0.00 16.532±0.00
ENST00000510859 N/A N/A N/A 2.405±0.00 2.516±0.00 N/A N/A N/A N/A N/A N/A 1.623±0.00 4.491±0.00
ENST00000555766 N/A N/A N/A N/A 0.028±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000196 CIL_000196_0001 CGP 2:113157325-113278950

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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