C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 250
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196150 ZNF250 9606 - 8:144876497-144902168 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000292579 ZNF250-001 144876951-144901461 protein_coding
  ENST00000417550 ZNF250-005 144881139-144901431 protein_coding
  ENST00000525694 ZNF250-011 144882760-144901423 protein_coding
  ENST00000527049 ZNF250-007 144889966-144902168 protein_coding
  ENST00000528028 ZNF250-014 144889687-144901453 retained_intron
  ENST00000528258 ZNF250-015 144876497-144901479 nonsense_mediated_decay
  ENST00000529780 ZNF250-002 144876536-144901465 nonsense_mediated_decay
  ENST00000533221 ZNF250-012 144882606-144901423 protein_coding
  ENST00000533543 ZNF250-004 144876536-144901465 nonsense_mediated_decay
  ENST00000533622 ZNF250-008 144882655-144901426 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000292579ENST00000417550ENST00000528258ENST00000533221ENST00000533622
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000292579 N/A N/A 0.260±0.04 N/A N/A 0.104±0.00 0.215±0.00 N/A 0.330±0.10 0.123±0.00 0.711±0.51 N/A 0.233±0.09
ENST00000417550 0.384±0.00 0.221±0.00 0.730±0.06 0.655±0.07 1.112±0.65 0.442±0.10 1.005±0.54 0.580±0.00 2.145±0.46 1.049±0.12 1.949±1.10 0.851±0.36 1.655±0.00
ENST00000528258 N/A N/A N/A N/A N/A N/A N/A 2.166±0.00 N/A N/A N/A N/A N/A
ENST00000533221 N/A N/A N/A N/A 0.727±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000533622 N/A N/A N/A N/A N/A N/A 0.773±0.00 N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IBA:IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000096199 si:ch211-194h1.2 zinc finger protein 324 protein_coding Danio_rerio
ENSMUSG00000054967 Zfp647 zinc finger protein 647 protein_coding Mus_musculus

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