C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 250
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000417550 ZNF250-005 ENSG00000196150 9606 - 8:144881139-144901431 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000417550
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000417550 0.384±0.00 0.221±0.00 0.730±0.06 0.655±0.07 1.112±0.65 0.442±0.10 1.005±0.54 0.580±0.00 2.145±0.46 1.049±0.12 1.949±1.10 0.851±0.36 1.655±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003700 IBA sequence-specific DNA binding transcription factor activity
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA:IBA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000048854 Zfp647-201 protein_coding Mus_musculus 0 1219
ENSMUST00000080406 Zfp251-201 protein_coding Mus_musculus 1e-34 152
ENSMUST00000088785 Zfp566-001 protein_coding Mus_musculus 8e-22 110
ENSMUST00000134473 Zfp664-005 processed_transcript Mus_musculus 0.000000001 69
ENSMUST00000111417 Zfp664-001 protein_coding Mus_musculus 0.000000001 69
ENSMUST00000117575 Gm14615-001 processed_pseudogene Mus_musculus 0.00000002 66
ENSMUST00000023179 Zfp7-201 protein_coding Mus_musculus 0.0000002 62
ENSMUST00000186855 Zfp939-002 processed_transcript Mus_musculus 0.00004 55
ENSMUST00000061201 Zfp939-001 transcribed_unprocessed_pseudogene Mus_musculus 0.00004 55

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