C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and SOCS box containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196372 ASB13 9606 - 10:5638867-5666595 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000357700 ASB13-004 5638868-5666578 protein_coding
  ENST00000459912 ASB13-006 5638868-5666578 nonsense_mediated_decay
  ENST00000479033 ASB13-005 5638868-5666595 processed_transcript
  ENST00000482921 ASB13-003 5648972-5651568 processed_transcript
  ENST00000493897 ASB13-002 5638867-5641812 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000357700ENST00000459912ENST00000479033ENST00000493897
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000357700 6.104±0.00 7.649±0.00 2.403±0.00 4.760±2.69 5.608±0.00 2.899±1.09 2.257±0.00 6.404±0.70 10.477±9.52 1.061±0.02 0.456±0.00 6.532±4.11 2.860±1.66 3.567±2.13
ENST00000459912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.504±0.00 N/A
ENST00000479033 N/A 3.597±0.00 N/A 1.916±0.00 N/A N/A 1.305±0.71 5.542±0.00 N/A 1.871±0.00 2.740±0.00 4.733±0.47 2.469±0.00 1.060±0.00
ENST00000493897 5.144±0.00 22.492±0.00 N/A 11.179±0.00 5.232±0.00 4.912±0.00 N/A 8.739±0.00 8.605±7.81 N/A 1.297±0.00 17.777±0.00 N/A 8.162±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00097T CIL_00097T_0001 VISTA 10:5274654-5878045
CIL_0008HB CIL_0008HB_0001 VISTA 10:5286025-5887846

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI:IEA protein binding
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045765 asb13a.2 ankyrin repeat and SOCS box-containing 13a, tandem duplicate 2 protein_coding Danio_rerio
ENSDARG00000079698 asb13a.1 ankyrin repeat and SOCS box-containing 13a, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000089833 asb13b ankyrin repeat and SOCS box containing 13b protein_coding Danio_rerio
ENSMUSG00000033781 Asb13 ankyrin repeat and SOCS box-containing 13 protein_coding Mus_musculus

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