C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ankyrin repeat and SOCS box-containing 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033781 Asb13 10090 + 13:3634032-3651774 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000042288 Asb13-001 3634032-3651774 protein_coding
  ENSMUST00000141147 Asb13-003 3634098-3650486 processed_transcript
  ENSMUST00000141967 Asb13-004 3634099-3642825 retained_intron
  ENSMUST00000156595 Asb13-002 3634089-3634782 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000042288ENSMUST00000141967
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000042288 10.696±2.15 16.279±1.19 7.471±1.14 7.649±1.98 12.881±5.04 15.658±2.99 6.441±0.63 32.893±7.17 15.530±12.21 19.248±4.16 5.817±1.13 13.729±6.61 5.676±2.25 0.484±0.31
ENSMUST00000141967 N/A 10.696±2.06 N/A 6.407±0.00 N/A 7.308±0.00 N/A N/A 12.281±0.00 N/A N/A 6.478±0.51 3.859±0.00 0.161±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008HB CIL_0008HB_0002 VISTA 13:3426204-4027216
CIL_00097T CIL_00097T_0002 VISTA 13:3441069-4044545

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0016567 IEA protein ubiquitination
GO:0035556 IEA intracellular signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045765 asb13a.2 ankyrin repeat and SOCS box-containing 13a, tandem duplicate 2 protein_coding Danio_rerio
ENSDARG00000079698 asb13a.1 ankyrin repeat and SOCS box-containing 13a, tandem duplicate 1 protein_coding Danio_rerio
ENSDARG00000089833 asb13b ankyrin repeat and SOCS box containing 13b protein_coding Danio_rerio
ENSG00000196372 ASB13 ankyrin repeat and SOCS box containing 13 protein_coding Homo_sapiens

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