C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: myosin, light chain 6B, alkali, smooth muscle and non-muscle
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196465 MYL6B 9606 + 12:56152256-56159647 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000405661 MYL6B-002 56152590-56156242 retained_intron
  ENST00000548548 MYL6B-012 56156937-56157975 retained_intron
  ENST00000548571 MYL6B-013 56157450-56159647 processed_transcript
  ENST00000549178 MYL6B-006 56153893-56157976 retained_intron
  ENST00000549380 MYL6B-007 56157615-56157981 retained_intron
  ENST00000550152 MYL6B-005 56153872-56155989 processed_transcript
  ENST00000550443 MYL6B-001 56152439-56157976 protein_coding
  ENST00000550550 MYL6B-009 56157357-56157976 retained_intron
  ENST00000551834 MYL6B-004 56152590-56154005 protein_coding
  ENST00000552568 MYL6B-011 56152607-56157976 protein_coding
  ENST00000553066 MYL6B-003 56152256-56157982 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainMuscleENST00000550152ENST00000550443
Transcript ID Brain Muscle
ENST00000550152 N/A 54.007±0.00
ENST00000550443 115.642±0.00 78.060±17.48

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003774 TAS motor activity
GO:0005509 IEA calcium ion binding
GO:0005515 IPI protein binding
GO:0005829 TAS cytosol
GO:0005859 TAS muscle myosin complex
GO:0006936 TAS muscle contraction
GO:0007519 TAS skeletal muscle tissue development
GO:0008152 TAS metabolic process
GO:0008307 TAS structural constituent of muscle
GO:0016459 TAS myosin complex
GO:0016461 TAS unconventional myosin complex
GO:0030049 TAS muscle filament sliding
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000008494 myl6 myosin, light chain 6, alkali, smooth muscle and non-muscle protein_coding Danio_rerio
ENSDARG00000033738 zgc:153867 zgc:153867 protein_coding Danio_rerio
ENSMUSG00000039824 Myl6b myosin, light polypeptide 6B protein_coding Mus_musculus

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