C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 238
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196553 LINC00238 9606 + 14:66486354-66498553 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000359454 LINC00238-001 66486371-66498553 lincRNA
  ENST00000389594 LINC00238-006 66486354-66498552 lincRNA
  ENST00000411796 LINC00238-005 66486391-66498552 lincRNA
  ENST00000432289 LINC00238-002 66486667-66498553 lincRNA
  ENST00000436570 LINC00238-003 66496683-66498553 retained_intron
  ENST00000450299 LINC00238-004 66486407-66498400 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartLiverOvaryTestisENST00000359454ENST00000389594ENST00000411796ENST00000436570ENST00000450299
Transcript ID Adrenal Breast Colon Heart Liver Ovary Testis
ENST00000359454 N/A 0.051±0.00 N/A N/A N/A N/A 13.615±6.52
ENST00000389594 0.101±0.00 N/A N/A N/A N/A N/A 5.527±0.00
ENST00000411796 N/A N/A N/A N/A N/A N/A 5.073±0.00
ENST00000436570 N/A N/A 0.806±0.18 0.126±0.00 2.810±0.00 0.076±0.00 N/A
ENST00000450299 N/A N/A N/A N/A N/A N/A 20.360±6.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001KA CIL_0001KA_0002 CGP 14:65410592-67181803

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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