C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: alcohol dehydrogenase 1B (class I), beta polypeptide
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196616 ADH1B 9606 - 4:99304964-99321442 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000305046 ADH1B-001 99304964-99321399 protein_coding
  ENST00000394887 ADH1B-201 99306389-99321442 protein_coding
  ENST00000504498 ADH1B-006 99317665-99321385 processed_transcript
  ENST00000506651 ADH1B-004 99307493-99321401 nonsense_mediated_decay
  ENST00000515694 ADH1B-002 99307243-99321398 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000305046ENST00000394887ENST00000504498ENST00000506651ENST00000515694
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000305046 115.831±0.00 N/A 0.902±0.00 0.192±0.00 N/A 5.985±0.00 3.757±0.00 N/A 18.404±0.00 N/A N/A 0.888±0.59 0.017±0.00 2.509±0.00
ENST00000394887 862.452±0.00 48.006±0.00 4.497±0.00 0.759±0.41 191.259±0.00 88.127±65.02 28.398±20.43 581.957±573.87 46.792±5.45 69.965±49.29 13.415±11.73 7.781±7.19 0.950±0.66 3.004±2.47
ENST00000504498 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.303±0.00 N/A 0.152±0.00 1.159±0.00
ENST00000506651 N/A N/A 5.805±0.00 0.206±0.00 29.004±0.00 50.917±28.49 12.745±0.00 N/A 60.512±0.00 N/A 6.716±2.68 6.628±2.75 1.680±0.05 N/A
ENST00000515694 N/A N/A 1.506±0.00 N/A N/A 4.777±0.00 1.629±0.00 N/A 9.397±0.00 21.372±0.00 N/A 0.831±0.00 N/A 0.131±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005C1 CIL_0005C1_0004 CGP 4:99276367-99321442
CIL_0005C1 CIL_0005C1_0005 CGP 4:99304964-99353027

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004024 IDA alcohol dehydrogenase activity, zinc-dependent
GO:0005829 TAS cytosol
GO:0006069 IDA ethanol oxidation
GO:0006805 TAS xenobiotic metabolic process
GO:0008270 IDA:IEA zinc ion binding
GO:0016491 IEA oxidoreductase activity
GO:0016747 IEA transferase activity, transferring acyl groups other than amino-acyl groups
GO:0044281 TAS small molecule metabolic process
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000024278 adh8b alcohol dehydrogenase 8b protein_coding Danio_rerio
ENSDARG00000087262 zgc:63568 zgc:63568 protein_coding Danio_rerio
ENSDARG00000088366 zgc:77938 zgc:77938 protein_coding Danio_rerio
ENSDARG00000091211 adh8a alcohol dehydrogenase 8a protein_coding Danio_rerio
ENSMUSG00000074207 Adh1 alcohol dehydrogenase 1 (class I) protein_coding Mus_musculus

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