C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB, member RAS oncogene family-like 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000196642 RABL6 9606 + 9:136807922-136957733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000311502 RABL6-009 136807961-136841187 protein_coding
  ENST00000357466 RABL6-005 136808159-136841187 protein_coding
  ENST00000371663 RABL6-201 136807922-136841187 protein_coding
  ENST00000371671 RABL6-202 136807922-136834476 protein_coding
  ENST00000425121 RABL6-008 136825783-136834170 protein_coding
  ENST00000432842 RABL6-203 136826597-136957733 protein_coding
  ENST00000435930 RABL6-004 136835171-136840185 protein_coding
  ENST00000436380 RABL6-001 136823526-136834340 protein_coding
  ENST00000461992 RABL6-003 136828472-136837590 processed_transcript
  ENST00000464941 RABL6-010 136821329-136841187 nonsense_mediated_decay
  ENST00000466096 RABL6-002 136826597-136836998 processed_transcript
  ENST00000484471 RABL6-007 136807961-136841182 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000311502ENST00000357466ENST00000371663ENST00000371671ENST00000435930ENST00000464941ENST00000484471
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000311502 26.251±0.00 24.034±0.00 2.575±0.00 17.955±13.81 16.566±14.28 13.737±11.79 11.478±10.13 9.519±8.25 3.712±1.29 10.068±9.40 10.807±9.20 23.005±15.89 25.158±10.95 27.451±0.00
ENST00000357466 10.010±0.00 14.835±0.00 N/A 24.708±0.00 11.473±8.94 N/A 9.594±0.00 7.305±5.95 N/A 1.664±0.00 7.466±1.36 60.911±0.00 41.967±0.00 41.977±27.98
ENST00000371663 N/A N/A N/A N/A N/A 2.826±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371671 N/A N/A N/A N/A N/A 4.724±0.00 2.423±0.00 N/A 2.132±0.00 N/A N/A 4.134±0.00 N/A N/A
ENST00000435930 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.174±0.00 N/A N/A N/A
ENST00000464941 N/A N/A 0.818±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000484471 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 6.323±0.00 N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005525 IEA GTP binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007264 IEA small GTPase mediated signal transduction
GO:0015031 IEA protein transport

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077653 RABL6 (1 of 2) RAB, member RAS oncogene family-like 6 protein_coding Danio_rerio
ENSDARG00000079046 rabl6 RAB, member RAS oncogene family-like 6 protein_coding Danio_rerio
ENSMUSG00000015087 Rabl6 RAB, member RAS oncogene family-like 6 protein_coding Mus_musculus

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