C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAB, member RAS oncogene family-like 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000015087 Rabl6 10090 - 2:25583018-25608521 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000058137 Rabl6-001 25583018-25608521 protein_coding
  ENSMUST00000128942 Rabl6-009 25584135-25585060 processed_transcript
  ENSMUST00000135084 Rabl6-008 25585189-25585823 processed_transcript
  ENSMUST00000140635 Rabl6-004 25587527-25608485 processed_transcript
  ENSMUST00000140778 Rabl6-006 25587445-25589159 processed_transcript
  ENSMUST00000140785 Rabl6-005 25596488-25608456 processed_transcript
  ENSMUST00000143855 Rabl6-007 25585674-25587307 processed_transcript
  ENSMUST00000146012 Rabl6-002 25584111-25608465 processed_transcript
  ENSMUST00000150206 Rabl6-003 25584111-25590372 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000058137ENSMUST00000128942ENSMUST00000140635ENSMUST00000140785ENSMUST00000146012ENSMUST00000150206
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000058137 19.564±1.47 45.957±8.82 22.129±1.43 32.359±18.43 20.667±9.46 28.683±2.74 15.226±3.80 23.418±2.13 10.790±4.06 19.271±4.94 34.853±2.02 47.335±8.27 18.105±4.22 17.262±1.95
ENSMUST00000128942 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 151.323±25.90 N/A
ENSMUST00000140635 N/A N/A N/A N/A 15.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000140785 N/A 54.505±0.00 N/A 268.949±0.00 N/A N/A N/A N/A N/A N/A N/A 79.947±71.33 76.803±16.94 148.982±0.00
ENSMUST00000146012 6.161±0.00 20.156±10.46 N/A N/A 6.215±1.00 N/A 5.508±0.26 N/A 4.711±0.00 4.592±0.78 N/A N/A N/A 4.946±0.66
ENSMUST00000150206 N/A N/A N/A 2.722±0.00 1.932±0.00 N/A N/A N/A 1.805±0.39 N/A N/A 4.194±0.09 3.618±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000QL CIL_0000QL_0002 CGP 2:25575416-25608521

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005525 IEA GTP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0007264 IEA small GTPase mediated signal transduction

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000077653 RABL6 (1 of 2) RAB, member RAS oncogene family-like 6 protein_coding Danio_rerio
ENSDARG00000079046 rabl6 RAB, member RAS oncogene family-like 6 protein_coding Danio_rerio
ENSG00000196642 RABL6 RAB, member RAS oncogene family-like 6 protein_coding Homo_sapiens

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