C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: NPSR1 antisense RNA 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197085 NPSR1-AS1 9606 - 7:34346512-34871582 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358772 NPSR1-AS1-004 34568252-34758272 antisense
  ENST00000419766 NPSR1-AS1-008 34346512-34758234 antisense
  ENST00000428922 NPSR1-AS1-007 34703850-34761191 retained_intron
  ENST00000431669 NPSR1-AS1-006 34643227-34871582 antisense
  ENST00000436945 NPSR1-AS1-003 34718862-34834328 antisense
  ENST00000439852 NPSR1-AS1-005 34566723-34758272 antisense
  ENST00000539747 NPSR1-AS1-001 34350422-34761191 antisense

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonPlacentaTestisENST00000358772ENST00000419766ENST00000431669ENST00000436945ENST00000539747
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Placenta Testis
ENST00000358772 N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A
ENST00000419766 0.011±0.00 N/A N/A 0.011±0.00 0.015±0.00 0.013±0.00 0.010±0.00 0.005±0.00
ENST00000431669 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000436945 N/A N/A N/A N/A N/A N/A N/A 0.060±0.04
ENST00000539747 N/A N/A 0.935±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008UM CIL_0008UM_0001 VISTA 7:33758350-34360399
CIL_0003FG CIL_0003FG_0001 CGP 7:33904911-34878332

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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