C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008UM_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1336 VISTA 9606 7:33758350-34360399
GeneTranscriptPositionBiotype
ENSG00000164619 (BMPER)
BMP binding endothelial regulator 		ENST00000297161 (BMPER-001) 33904911-34155872 protein_coding
ENST00000436222 (BMPER-004) 33905533-34046313 protein_coding
ENST00000444773 (BMPER-003) 33905539-33966561 nonsense_mediated_decay
ENST00000448280 (BMPER-007) 33904911-33922028 nonsense_mediated_decay
ENST00000476525 (BMPER-006) 34067232-34143360 processed_transcript
ENST00000494786 (BMPER-005) 34042676-34055209 processed_transcript
ENST00000496609 (BMPER-002) 33905503-33937560 retained_intron
ENSG00000197085 (NPSR1-AS1)
NPSR1 antisense RNA 1 		ENST00000358772 (NPSR1-AS1-004) 34568252-34758272 antisense
ENST00000419766 (NPSR1-AS1-008) 34346512-34758234 antisense
ENST00000428922 (NPSR1-AS1-007) 34703850-34761191 retained_intron
ENST00000431669 (NPSR1-AS1-006) 34643227-34871582 antisense
ENST00000436945 (NPSR1-AS1-003) 34718862-34834328 antisense
ENST00000439852 (NPSR1-AS1-005) 34566723-34758272 antisense
ENST00000539747 (NPSR1-AS1-001) 34350422-34761191 antisense
ENSG00000233219 (RP11-89N17.3)
 ENST00000440074 (RP11-89N17.3-001) 33868501-33874231 lincRNA
ENSG00000236212 (AC009262.2)
 ENST00000446484 (AC009262.2-001) 34209526-34256343 lincRNA
ENSG00000236494 (RP11-89N17.4)
 ENST00000420185 (RP11-89N17.4-001) 33793168-33803130 lincRNA
ENST00000440034 (RP11-89N17.4-002) 33795468-33803156 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_0008UM_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1336 VISTA 10090 9:23077927-23679852
GeneTranscriptPositionBiotype
ENSMUSG00000031963 (Bmper)
BMP-binding endothelial regulator 		ENSMUST00000071982 (Bmper-201) 23223076-23485202 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UM_0001ENSG00000164619ENST00000297161ENST00000436222ENST00000444773ENST00000448280ENST00000476525ENST00000494786ENST00000496609ENSG00000197085ENST00000358772ENST00000419766ENST00000428922ENST00000431669ENST00000436945ENST00000439852ENST00000539747ENSG00000233219ENST00000440074ENSG00000236212ENST00000446484ENSG00000236494ENST00000420185ENST00000440034CIL_0008UM_0002ENSMUSG00000031963ENSMUST00000071982
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008UM_0001ENSG00000164619ENST00000297161ENST00000436222ENST00000476525ENST00000494786ENST00000496609ENSG00000197085ENST00000358772ENST00000419766ENST00000431669ENST00000436945ENST00000539747ENSG00000233219ENST00000440074ENSG00000236212ENST00000446484ENSG00000236494ENST00000420185ENST00000440034CIL_0008UM_0002ENSMUSG00000031963ENSMUST00000071982
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000164619 ENST00000297161 0.519±0.00 5.991±0.00 N/A 1.507±0.35 0.436±0.29 0.362±0.28 0.173±0.06 0.804±0.69 0.709±0.44 1.133±0.01 0.331±0.00 0.327±0.27 2.359±0.62 0.376±0.13
ENST00000436222 N/A N/A N/A 7.708±0.00 N/A 0.313±0.00 N/A 2.809±0.00 1.295±0.00 3.023±0.00 0.701±0.00 0.493±0.00 N/A N/A
ENST00000444773 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000448280 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000476525 N/A N/A N/A N/A 1.454±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494786 N/A N/A N/A N/A N/A N/A N/A N/A 0.890±0.00 N/A N/A N/A N/A N/A
ENST00000496609 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.144±0.00 N/A N/A
ENSG00000197085 ENST00000358772 N/A 0.030±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000419766 0.011±0.00 N/A N/A 0.011±0.00 0.015±0.00 0.013±0.00 N/A N/A N/A N/A N/A N/A 0.010±0.00 0.005±0.00
ENST00000428922 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000431669 0.038±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000436945 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.060±0.04
ENST00000439852 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000539747 N/A N/A 0.935±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000233219 ENST00000440074 N/A N/A N/A N/A 0.146±0.00 0.103±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000236212 ENST00000446484 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.040±0.00 0.040±0.00
ENSG00000236494 ENST00000420185 N/A 0.008±0.00 0.241±0.00 0.087±0.00 0.053±0.00 N/A 0.095±0.00 0.489±0.00 0.266±0.00 0.345±0.00 N/A 0.070±0.07 0.046±0.00 0.038±0.01
ENST00000440034 0.011±0.00 0.011±0.00 0.313±0.00 0.043±0.00 0.236±0.21 0.224±0.00 0.058±0.05 0.176±0.04 0.166±0.00 0.183±0.00 N/A 0.095±0.10 N/A 0.035±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031963 ENSMUST00000071982 2.541±0.53 0.517±0.26 0.470±0.15 2.312±0.63 3.848±0.84 0.476±0.11 0.688±0.36 0.166±0.03 0.235±0.12 6.481±0.73 1.020±0.35 2.303±0.64 3.718±4.71 0.176±0.08

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