C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger and SCAN domain containing 5B
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197213 ZSCAN5B 9606 - 19:56189570-56197920 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358992 ZSCAN5B-201 56189689-56193052 protein_coding
  ENST00000586855 ZSCAN5B-001 56189570-56197920 protein_coding
  ENST00000587032 ZSCAN5B-003 56192027-56197815 protein_coding
  ENST00000589938 ZSCAN5B-002 56191930-56197793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartKidneyLiverOvaryTestisENST00000358992ENST00000586855ENST00000587032
Transcript ID Brain Colon Heart Kidney Liver Ovary Testis
ENST00000358992 0.039±0.00 0.023±0.00 N/A 0.147±0.00 0.011±0.00 0.038±0.00 0.767±0.23
ENST00000586855 N/A N/A 0.016±0.00 N/A N/A 0.019±0.00 0.514±0.14
ENST00000587032 N/A N/A N/A N/A N/A 0.058±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00046V CIL_00046V_0001 CGP 19:56176020-56197920

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000981 IBA sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA:IBA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 IBA regulation of transcription from RNA polymerase II promoter
GO:0006366 IBA transcription from RNA polymerase II promoter
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000058028 Zscan5b zinc finger and SCAN domain containing 5B protein_coding Mus_musculus

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