C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: TBC1 domain family, member 9B (with GRAM domain)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197226 TBC1D9B 9606 - 5:179862066-179907859 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000355235 TBC1D9B-002 179862066-179907856 protein_coding
  ENST00000356834 TBC1D9B-001 179862066-179907859 protein_coding
  ENST00000517782 TBC1D9B-018 179888103-179894458 processed_transcript
  ENST00000518085 TBC1D9B-008 179862066-179867028 processed_transcript
  ENST00000518115 TBC1D9B-010 179879046-179880023 retained_intron
  ENST00000518120 TBC1D9B-014 179887671-179888314 processed_transcript
  ENST00000518459 TBC1D9B-011 179874927-179879406 retained_intron
  ENST00000519746 TBC1D9B-005 179862066-179871805 protein_coding
  ENST00000519757 TBC1D9B-004 179867304-179871816 retained_intron
  ENST00000520794 TBC1D9B-007 179862743-179867302 retained_intron
  ENST00000520912 TBC1D9B-006 179868058-179870408 retained_intron
  ENST00000521469 TBC1D9B-003 179862738-179872274 retained_intron
  ENST00000521669 TBC1D9B-015 179872416-179873135 retained_intron
  ENST00000522029 TBC1D9B-016 179884369-179893237 processed_transcript
  ENST00000522180 TBC1D9B-013 179867241-179871501 processed_transcript
  ENST00000522224 TBC1D9B-017 179893425-179907852 nonsense_mediated_decay
  ENST00000522472 TBC1D9B-019 179862373-179879703 protein_coding
  ENST00000522921 TBC1D9B-012 179867805-179870700 retained_intron
  ENST00000524222 TBC1D9B-009 179863404-179893233 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000355235ENST00000356834
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000355235 32.390±0.00 25.203±0.00 6.473±0.00 5.169±0.00 22.854±12.11 16.437±4.57 2.290±0.00 26.449±16.97 21.637±13.99 7.041±0.00 35.215±20.82 27.436±3.12 19.077±0.57
ENST00000356834 N/A N/A N/A 21.173±14.16 N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XF CIL_0000XF_0002 CGP 5:179806398-179862173

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005509 IEA calcium ion binding
GO:0016021 IEA integral component of membrane
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043627 TBC1D9B TBC1 domain family, member 9B (with GRAM domain) protein_coding Danio_rerio
ENSMUSG00000036644 Tbc1d9b TBC1 domain family, member 9B protein_coding Mus_musculus

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