C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TBC1 domain family, member 9B (with GRAM domain)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000355235 TBC1D9B-002 ENSG00000197226 9606 - 5:179862066-179907856 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000355235
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000355235 32.390±0.00 25.203±0.00 6.473±0.00 5.169±0.00 22.854±12.11 16.437±4.57 2.290±0.00 26.449±16.97 21.637±13.99 7.041±0.00 35.215±20.82 27.436±3.12 19.077±0.57

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000XF CIL_0000XF_0002 CGP 5:179806398-179862173

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005097 IEA Rab GTPase activator activity
GO:0005509 IEA calcium ion binding
GO:0016021 IEA integral component of membrane
GO:0032313 IEA regulation of Rab GTPase activity
GO:0032851 IEA positive regulation of Rab GTPase activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000093138 Tbc1d9b-001 protein_coding Mus_musculus 0 4261
ENSMUST00000101270 Tbc1d9b-002 protein_coding Mus_musculus 0 3598
ENSMUST00000148887 Tbc1d9b-005 processed_transcript Mus_musculus 0 545
ENSMUST00000124605 Tbc1d9b-006 processed_transcript Mus_musculus 0 350
ENSMUST00000126758 Tbc1d9b-004 processed_transcript Mus_musculus 0 339
ENSDART00000083797 TBC1D9B-201 protein_coding Danio_rerio 0 298
ENSMUST00000147628 Tbc1d9b-003 processed_transcript Mus_musculus 0 285
ENSMUST00000141520 Tbc1d9b-008 processed_transcript Mus_musculus 0 233
ENSMUST00000137852 Tbc1d9b-007 processed_transcript Mus_musculus 0 226

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