C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif containing 33
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197323 TRIM33 9606 - 1:114392777-114511160 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358465 TRIM33-001 114392777-114511160 protein_coding
  ENST00000369543 TRIM33-002 114397608-114511160 protein_coding
  ENST00000448034 TRIM33-003 114397608-114463236 protein_coding
  ENST00000450349 TRIM33-201 114397621-114511160 protein_coding
  ENST00000476908 TRIM33-004 114404326-114406967 processed_transcript
  ENST00000478032 TRIM33-006 114397608-114399609 processed_transcript
  ENST00000492227 TRIM33-005 114396258-114397838 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000358465ENST00000369543ENST00000448034ENST00000450349
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000358465 N/A 0.897±0.00 N/A 1.458±0.21 1.405±0.58 0.940±0.00 1.067±0.71 1.261±0.00 3.024±2.30 1.334±0.00 2.641±0.00 3.921±1.21 1.653±0.00 2.740±0.00
ENST00000369543 1.896±0.00 N/A 6.155±0.00 N/A N/A 2.954±0.00 0.764±0.00 N/A 3.814±0.00 4.716±0.00 N/A 3.712±0.00 2.335±0.00 N/A
ENST00000448034 N/A N/A N/A N/A N/A N/A N/A 1.456±0.00 N/A N/A N/A N/A 5.908±0.00 10.809±3.64
ENST00000450349 N/A N/A N/A 5.252±0.00 5.512±0.00 2.936±0.64 1.927±0.00 2.012±0.00 N/A 4.181±0.00 2.173±0.00 4.488±0.00 N/A 4.376±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000122 TAS negative regulation of transcription from RNA polymerase II promoter
GO:0003677 IEA DNA binding
GO:0004842 TAS ubiquitin-protein transferase activity
GO:0005515 IPI:IEA protein binding
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005654 TAS nucleoplasm
GO:0006351 TAS transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0016567 IEA protein ubiquitination
GO:0016874 IEA ligase activity
GO:0017015 IDA regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 IDA negative regulation of BMP signaling pathway
GO:0043231 IDA intracellular membrane-bounded organelle
GO:0045892 NAS negative regulation of transcription, DNA-templated
GO:0070410 IPI co-SMAD binding
GO:0070412 IPI R-SMAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016181 trim33 tripartite motif-containing 33 protein_coding Danio_rerio
ENSMUSG00000033014 Trim33 tripartite motif-containing 33 protein_coding Mus_musculus

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