C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: tripartite motif-containing 33
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033014 Trim33 10090 + 3:103279293-103358768 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000029444 Trim33-201 103279293-103358768 protein_coding
  ENSMUST00000106860 Trim33-202 103279293-103358768 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000029444ENSMUST00000106860
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000029444 1.404±0.41 N/A 2.495±0.32 3.565±0.67 1.509±0.91 N/A 0.759±0.32 0.824±0.32 1.908±0.76 1.776±1.03 1.132±0.17 4.185±1.18 4.752±0.48 4.026±0.98
ENSMUST00000106860 2.121±1.12 3.420±0.31 1.132±0.30 4.249±1.07 3.000±1.13 2.743±0.33 1.118±0.19 2.126±0.72 1.046±0.35 2.720±0.85 0.287±0.06 4.173±0.84 2.187±0.66 1.801±0.89

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006WV CIL_0006WV_0002 CGP 3:103171655-103358768

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0005634 IDA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0008270 IEA zinc ion binding
GO:0016567 ISS protein ubiquitination
GO:0016874 IEA ligase activity
GO:0017015 ISS regulation of transforming growth factor beta receptor signaling pathway
GO:0030514 ISS negative regulation of BMP signaling pathway
GO:0043231 IEA intracellular membrane-bounded organelle
GO:0070410 ISS co-SMAD binding
GO:0070412 ISS R-SMAD binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016181 trim33 tripartite motif-containing 33 protein_coding Danio_rerio
ENSG00000197323 TRIM33 tripartite motif containing 33 protein_coding Homo_sapiens

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