C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glycophorin E (MNS blood group)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197465 GYPE 9606 - 4:143870867-143905563 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000358615 GYPE-001 143870867-143905559 protein_coding
  ENST00000437468 GYPE-003 143875313-143905563 protein_coding
  ENST00000506264 GYPE-002 143870896-143905519 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000358615ENST00000437468ENST00000506264
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000358615 0.495±0.00 1.036±0.00 N/A 0.431±0.31 0.668±0.00 0.245±0.00 0.340±0.00 0.187±0.00 0.012±0.00 0.263±0.00 0.022±0.00 0.134±0.08 0.208±0.01
ENST00000437468 N/A N/A 1.286±0.00 0.107±0.00 N/A N/A N/A N/A N/A 0.374±0.00 0.075±0.00 N/A 0.402±0.00
ENST00000506264 N/A N/A 0.045±0.00 N/A 0.274±0.00 N/A 0.060±0.00 N/A N/A 0.430±0.00 0.023±0.00 0.061±0.00 0.184±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008KM CIL_0008KM_0001 VISTA 4:143819940-144420422

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005886 TAS plasma membrane
GO:0005887 TAS integral component of plasma membrane
GO:0016021 IEA integral component of membrane

Homologs

No Homologs available.

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