C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosome production factor 2 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000197498 RPF2 9606 + 6:110982015-111028263 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000368864 RPF2-002 110982015-111024327 nonsense_mediated_decay
  ENST00000425871 RPF2-003 110982316-111024327 protein_coding
  ENST00000441448 RPF2-001 110982015-111026100 protein_coding
  ENST00000607388 RPF2-004 110982050-111028263 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000368864ENST00000425871ENST00000441448ENST00000607388
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000368864 3.347±0.00 2.103±0.00 N/A N/A N/A N/A 1.395±0.00 N/A N/A N/A N/A 28.072±0.00 9.551±0.00 29.081±0.00
ENST00000425871 N/A 3.814±0.00 N/A 2.873±0.00 2.228±0.00 3.786±0.00 N/A N/A 2.531±0.00 N/A N/A N/A N/A 5.808±0.00
ENST00000441448 2.773±0.00 2.468±0.00 1.381±0.00 2.355±0.03 3.713±2.62 4.499±0.02 2.161±1.11 3.011±0.48 2.615±0.62 3.744±0.00 4.552±0.00 6.811±4.13 3.519±0.96 6.247±2.04
ENST00000607388 0.805±0.00 N/A 0.398±0.00 2.117±0.00 0.525±0.00 1.600±0.89 N/A N/A 0.802±0.00 0.763±0.14 N/A 3.766±1.63 1.063±0.00 N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043960 rpf2 ribosome production factor 2 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000038510 Rpf2 ribosome production factor 2 homolog (S. cerevisiae) protein_coding Mus_musculus

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