C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosome production factor 2 homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000038510 Rpf2 10090 - 10:40223246-40247036 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045114 Rpf2-001 40223246-40247002 protein_coding
  ENSMUST00000181995 Rpf2-005 40223813-40247003 protein_coding
  ENSMUST00000182287 Rpf2-006 40223683-40227798 processed_transcript
  ENSMUST00000183052 Rpf2-003 40223888-40247027 protein_coding
  ENSMUST00000183114 Rpf2-004 40225340-40246993 protein_coding
  ENSMUST00000183309 Rpf2-002 40223427-40247036 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000045114ENSMUST00000181995ENSMUST00000182287ENSMUST00000183052ENSMUST00000183114ENSMUST00000183309
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000045114 0.440±0.31 0.853±0.36 N/A 1.123±0.00 0.381±0.06 0.731±0.15 N/A 0.395±0.00 0.101±0.02 0.204±0.04 0.429±0.00 0.960±0.48 N/A 1.437±0.19
ENSMUST00000181995 1.018±0.40 N/A N/A 8.134±0.00 0.691±0.16 0.478±0.02 0.830±0.18 0.841±0.17 1.248±0.33 1.467±0.21 N/A 3.734±4.93 19.382±14.92 8.952±0.00
ENSMUST00000182287 N/A N/A N/A 34.367±0.00 N/A N/A N/A 1.457±0.64 N/A N/A 3.215±0.28 27.559±19.90 63.692±41.85 31.861±39.65
ENSMUST00000183052 2.176±0.07 N/A N/A N/A 0.545±0.00 1.227±0.39 1.056±0.00 N/A 0.299±0.00 0.801±0.00 N/A 1.626±0.40 N/A N/A
ENSMUST00000183114 N/A 0.936±0.00 N/A N/A 1.739±0.00 N/A N/A N/A 1.516±0.64 N/A N/A 2.537±0.00 7.424±0.00 N/A
ENSMUST00000183309 0.876±0.21 N/A 4.554±0.41 4.926±0.00 0.797±0.46 N/A 1.473±0.36 1.390±0.50 5.907±5.89 0.738±0.41 5.463±0.85 4.428±4.11 9.440±4.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002FT CIL_0002FT_0002 CGP 10:40033535-40247036

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IEA nucleus
GO:0008150 ND biological_process
GO:0044822 IEA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000043960 rpf2 ribosome production factor 2 homolog (S. cerevisiae) protein_coding Danio_rerio
ENSG00000197498 RPF2 ribosome production factor 2 homolog (S. cerevisiae) protein_coding Homo_sapiens

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