C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: transcription factor Dp-1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000198176 TFDP1 9606 + 13:113584721-113641470 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000375370 TFDP1-001 113584741-113641470 protein_coding
  ENST00000408980 TFDP1-005 113585333-113635996 protein_coding
  ENST00000453989 TFDP1-006 113585426-113633287 protein_coding
  ENST00000464794 TFDP1-004 113584733-113586180 processed_transcript
  ENST00000465174 TFDP1-003 113584743-113633999 processed_transcript
  ENST00000475254 TFDP1-002 113584721-113633285 processed_transcript
  ENST00000494812 TFDP1-007 113637151-113640684 processed_transcript
  ENST00000544902 TFDP1-008 113585273-113640310 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000375370ENST00000408980ENST00000464794ENST00000475254ENST00000494812ENST00000544902
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000375370 6.440±0.00 10.078±0.00 0.665±0.00 3.874±1.44 6.691±5.21 4.347±0.55 6.319±5.45 8.281±5.08 6.471±0.00 5.296±3.67 2.204±1.11 23.180±17.15 21.266±8.24 31.607±18.66
ENST00000408980 N/A N/A N/A N/A 2.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464794 N/A N/A 2.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475254 N/A N/A N/A N/A N/A 5.082±0.00 1.467±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000494812 N/A N/A N/A 3.200±0.00 4.803±2.14 N/A 7.828±0.00 11.623±0.00 5.286±0.00 6.335±2.96 2.510±0.00 N/A N/A 13.825±0.00
ENST00000544902 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.911±0.00 N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000TH CIL_0000TH_0001 CGP 13:113490995-113641470
CIL_00076E CIL_00076E_0001 CGP 13:113584721-113658186

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000082 TAS G1/S transition of mitotic cell cycle
GO:0000278 IEA:TAS mitotic cell cycle
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003713 IEA transcription coactivator activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0005667 IEA transcription factor complex
GO:0006351 IEA:TAS transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006357 TAS regulation of transcription from RNA polymerase II promoter
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0006915 TAS apoptotic process
GO:0007049 IEA cell cycle
GO:0007179 TAS transforming growth factor beta receptor signaling pathway
GO:0007219 TAS Notch signaling pathway
GO:0008134 IEA:IPI transcription factor binding
GO:0008283 TAS cell proliferation
GO:0008544 IEA epidermis development
GO:0010467 TAS gene expression
GO:0019904 IPI protein domain specific binding
GO:0043276 IEA anoikis
GO:0045893 IEA positive regulation of transcription, DNA-templated
GO:0045944 TAS positive regulation of transcription from RNA polymerase II promoter
GO:0097193 TAS intrinsic apoptotic signaling pathway
GO:1900740 TAS positive regulation of protein insertion into mitochondrial membrane involved in apoptotic signaling pathway
GO:2000278 IEA regulation of DNA biosynthetic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000019293 tfdp1a transcription factor Dp-1, a protein_coding Danio_rerio
ENSMUSG00000038482 Tfdp1 transcription factor Dp 1 protein_coding Mus_musculus

Loading