C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0000TH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000150403-ENSG00000198176 CGP 9606 13:113490995-113641470
GeneTranscriptPositionBiotype
ENSG00000150403 (TMCO3)
transmembrane and coiled-coil domains 3 		ENST00000375391 (TMCO3-008) 113491043-113550229 protein_coding
ENST00000434316 (TMCO3-007) 113490995-113550195 protein_coding
ENST00000460039 (TMCO3-002) 113545755-113549915 processed_transcript
ENST00000462877 (TMCO3-004) 113500021-113520661 protein_coding
ENST00000465556 (TMCO3-001) 113520546-113539482 processed_transcript
ENST00000473287 (TMCO3-005) 113495871-113498645 protein_coding
ENST00000474393 (TMCO3-006) 113491096-113535286 protein_coding
ENST00000491166 (TMCO3-003) 113547149-113549638 processed_transcript
ENST00000619336 (TMCO3-011) 113548333-113552214 nonsense_mediated_decay
ENST00000620021 (TMCO3-010) 113548303-113554590 protein_coding
ENST00000622371 (TMCO3-009) 113500024-113506062 protein_coding
ENSG00000198176 (TFDP1)
transcription factor Dp-1 		ENST00000375370 (TFDP1-001) 113584741-113641470 protein_coding
ENST00000408980 (TFDP1-005) 113585333-113635996 protein_coding
ENST00000453989 (TFDP1-006) 113585426-113633287 protein_coding
ENST00000464794 (TFDP1-004) 113584733-113586180 processed_transcript
ENST00000465174 (TFDP1-003) 113584743-113633999 processed_transcript
ENST00000475254 (TFDP1-002) 113584721-113633285 processed_transcript
ENST00000494812 (TFDP1-007) 113637151-113640684 processed_transcript
ENST00000544902 (TFDP1-008) 113585273-113640310 nonsense_mediated_decay
ENSG00000276248 (RP11-230F18.5)
 ENST00000619092 (RP11-230F18.5-001) 113527260-113530621 sense_intronic
ENSG00000276916 (RP11-230F18.6)
 ENST00000619338 (RP11-230F18.6-001) 113511747-113514473 sense_intronic
CIL_0000TH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038497-ENSMUSG00000038482 CGP 10090 8:13288013-13377702
GeneTranscriptPositionBiotype
ENSMUSG00000038482 (Tfdp1)
transcription factor Dp 1 		ENSMUST00000170909 (Tfdp1-201) 13339674-13377702 protein_coding
ENSMUSG00000038497 (Tmco3)
transmembrane and coiled-coil domains 3 		ENSMUST00000045229 (Tmco3-201) 13288013-13322924 protein_coding
ENSMUSG00000038506 (Dcun1d2)
DCN1, defective in cullin neddylation 1, domain containing 2 (S. cerevisiae) 		ENSMUST00000045366 (Dcun1d2-201) 13255963-13288126 protein_coding
ENSMUST00000110838 (Dcun1d2-202) 13255963-13288126 protein_coding
ENSMUST00000110839 (Dcun1d2-203) 13255963-13288126 protein_coding
ENSMUST00000110840 (Dcun1d2-204) 13255963-13288126 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TH_0001ENSG00000150403ENST00000375391ENST00000434316ENST00000460039ENST00000462877ENST00000465556ENST00000473287ENST00000474393ENST00000491166ENST00000619336ENST00000620021ENST00000622371ENSG00000198176ENST00000375370ENST00000408980ENST00000453989ENST00000464794ENST00000465174ENST00000475254ENST00000494812ENST00000544902ENSG00000276248ENST00000619092ENSG00000276916ENST00000619338CIL_0000TH_0002ENSMUSG00000038482ENSMUST00000170909ENSMUSG00000038497ENSMUST00000045229ENSMUSG00000038506ENSMUST00000045366ENSMUST00000110838ENSMUST00000110839ENSMUST00000110840
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000TH_0001ENSG00000150403ENST00000375391ENST00000434316ENST00000460039ENST00000473287ENST00000474393ENST00000622371ENSG00000198176ENST00000375370ENST00000408980ENST00000464794ENST00000475254ENST00000494812ENST00000544902ENSG00000276248ENST00000619092ENSG00000276916ENST00000619338CIL_0000TH_0002ENSMUSG00000038482ENSMUST00000170909ENSMUSG00000038497ENSMUST00000045229ENSMUSG00000038506ENSMUST00000045366ENSMUST00000110838ENSMUST00000110839ENSMUST00000110840
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000150403 ENST00000375391 N/A N/A N/A 2.971±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.685±0.00
ENST00000434316 11.284±0.00 8.420±0.00 3.396±0.00 5.526±1.23 8.478±3.73 6.115±1.76 4.037±2.55 9.959±8.28 6.857±4.58 6.845±4.64 1.359±0.32 22.992±9.91 16.265±3.18 3.696±1.04
ENST00000460039 N/A N/A N/A N/A N/A 13.661±0.00 N/A N/A 11.207±0.00 N/A 3.964±0.00 N/A N/A N/A
ENST00000462877 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465556 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000473287 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 26.270±0.00 N/A N/A
ENST00000474393 N/A N/A N/A N/A N/A N/A N/A N/A 1.138±0.00 0.695±0.00 1.921±0.00 N/A N/A N/A
ENST00000491166 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619336 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000620021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000622371 N/A N/A 1.377±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000198176 ENST00000375370 6.440±0.00 10.078±0.00 0.665±0.00 3.874±1.44 6.691±5.21 4.347±0.55 6.319±5.45 8.281±5.08 6.471±0.00 5.296±3.67 2.204±1.11 23.180±17.15 21.266±8.24 31.607±18.66
ENST00000408980 N/A N/A N/A N/A 2.236±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000453989 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464794 N/A N/A 2.423±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000465174 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475254 N/A N/A N/A N/A N/A 5.082±0.00 1.467±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000494812 N/A N/A N/A 3.200±0.00 4.803±2.14 N/A 7.828±0.00 11.623±0.00 5.286±0.00 6.335±2.96 2.510±0.00 N/A N/A 13.825±0.00
ENST00000544902 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.911±0.00 N/A N/A N/A N/A
ENSG00000276248 ENST00000619092 0.169±0.00 0.337±0.00 0.609±0.00 0.324±0.18 0.377±0.15 0.527±0.26 0.318±0.09 0.128±0.04 0.166±0.15 0.521±0.17 0.036±0.00 0.514±0.27 0.209±0.07 0.566±0.34
ENSG00000276916 ENST00000619338 0.237±0.00 0.431±0.00 N/A 0.629±0.15 0.163±0.05 0.593±0.00 0.343±0.00 0.145±0.00 0.312±0.00 0.652±0.00 N/A 2.593±2.29 0.952±0.16 0.533±0.34
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038482 ENSMUST00000170909 24.016±6.23 10.694±0.82 23.038±16.02 42.121±31.31 11.952±4.04 13.679±4.81 14.188±0.53 12.513±2.35 15.444±10.89 7.502±1.89 11.706±1.81 24.871±4.09 47.344±16.14 18.468±3.65
ENSMUSG00000038497 ENSMUST00000045229 5.323±0.70 13.692±0.47 3.166±0.86 5.402±3.10 9.207±1.83 31.376±8.02 4.246±0.63 12.858±4.49 1.903±0.62 9.664±0.25 2.795±0.28 9.738±4.95 1.687±0.94 1.736±1.09
ENSMUSG00000038506 ENSMUST00000045366 2.784±0.00 8.637±4.56 N/A 5.018±2.00 N/A N/A 12.537±2.43 N/A 1.733±0.55 3.355±0.12 26.057±3.18 3.203±0.56 2.414±0.53 0.985±0.43
ENSMUST00000110838 N/A N/A N/A N/A 2.072±0.00 N/A N/A N/A 1.396±0.00 N/A N/A 5.239±0.00 1.259±0.10 0.692±0.31
ENSMUST00000110839 N/A N/A N/A N/A N/A N/A 5.704±0.00 N/A 0.954±0.00 N/A N/A 5.564±0.00 N/A N/A
ENSMUST00000110840 5.749±1.19 10.862±1.98 5.848±0.87 5.115±0.81 4.123±0.53 12.292±0.10 6.395±1.61 9.001±1.59 3.992±1.02 8.023±1.02 N/A 10.088±5.25 4.209±1.60 N/A

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